RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TULP2O00295 520 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 PJA2O43164 708 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 ACTN2P35609 894 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 ZSCAN26Q16670 478 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 KRT79Q5XKE5 535 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 MMGT1Q8N4V1 131 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 TSG101Q99816 390 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 NUCKS1Q9H1E3 243 aaKnown RBP18.57■□□□□ 0.56
CMTM3-213ENST00000566756 SH2D4AQ9H788 454 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 KANSL2Q9H9L4 492 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 SUGCTQ9HAC7 445 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 NYAP2Q9P242 653 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 SNX12Q9UMY4 172 aa18.57■□□□□ 0.56
CMTM3-213ENST00000566756 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-213ENST00000566756 IDEP14735 1019 aa18.56■□□□□ 0.56
CMTM3-213ENST00000566756 GCFC2P16383 781 aaKnown RBP18.56■□□□□ 0.56
CMTM3-213ENST00000566756 RPS12P25398 132 aaKnown RBP18.56■□□□□ 0.56
CMTM3-213ENST00000566756 CCDC155Q8N6L0 562 aa18.56■□□□□ 0.56
CMTM3-213ENST00000566756 ARHGAP20Q9P2F6 1191 aa18.56■□□□□ 0.56
CMTM3-213ENST00000566756 PCDHA13Q9Y5I0 950 aa18.56■□□□□ 0.56
CMTM3-213ENST00000566756 SSU72P8A0A1W2PR75 194 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 MPHOSPH10O00566 681 aaKnown RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 ZNF263O14978 683 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 LMAN1P49257 510 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 HYIQ5T013 277 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 LRRC55Q6ZSA7 311 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 TMEM179Q6ZVK1 233 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 IFIH1Q9BYX4 1025 aaKnown RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 VAT1LQ9HCJ6 419 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 TMEM260Q9NX78 707 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 PNMA6FA0A0J9YX94 578 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 EDIL3O43854 480 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 TCP1P17987 556 aaKnown RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 CLK2P49760 499 aaKnown RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 KIF11P52732 1056 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 COG1Q8WTW3 980 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 SYN2Q92777 582 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-213ENST00000566756 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 FAN1Q9Y2M0 1017 aa18.55■□□□□ 0.56
CMTM3-213ENST00000566756 SLC37A4O43826 429 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 SRGAP2O75044 1071 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 IVLP07476 585 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 GPATCH4Q5T3I0 446 aaKnown RBP18.54■□□□□ 0.56
CMTM3-213ENST00000566756 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
CMTM3-213ENST00000566756 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 CCDC102AQ96A19 550 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 ALS2CR12Q96Q35 445 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 TSPYL1Q9H0U9 437 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 TFR2Q9UP52 801 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 CNTNAP1P78357 1384 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 KDM3AQ9Y4C1 1321 aa18.54■□□□□ 0.56
CMTM3-213ENST00000566756 TDP2O95551 362 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 ZNF280AP59817 542 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 CCNI2Q6ZMN8 369 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 LEKR1Q6ZMV7 388 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 CREG2Q8IUH2 290 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 BAP1Q92560 729 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 DDX12PQ92771 950 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 GLT8D2Q9H1C3 349 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 JADE2Q9NQC1 790 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 HPCAL4Q9UM19 191 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 CLRN2A0PK11 232 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 MACROD2A1Z1Q3 448 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 TCP10L2B9ZVM9 353 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 RBAK-RBAKDNI3L0D1 243 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 FZD9O00144 591 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 N4BP1O75113 896 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 GNA14O95837 355 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 SLURP2P0DP57 97 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 GYS2P54840 703 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 MARSP56192 900 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 EIF6P56537 245 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 CYP27A1Q02318 531 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 ZNF543Q08ER8 600 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 ASTE1Q2TB18 679 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 MYOCDQ8IZQ8 938 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 HPS3Q969F9 1004 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 CEP63Q96MT8 703 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 NT5C3AQ9H0P0 336 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 SYNPO2Q9UMS6 1093 aa18.53■□□□□ 0.56
CMTM3-213ENST00000566756 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
CMTM3-213ENST00000566756 PDE2AO00408 941 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-213ENST00000566756 WNT10BO00744 389 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 TBC1D12O60347 775 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 EIF4A3P38919 411 aaKnown RBP18.52■□□□□ 0.56
CMTM3-213ENST00000566756 MRPL12P52815 198 aaKnown RBP18.52■□□□□ 0.56
CMTM3-213ENST00000566756 ABCB5Q2M3G0 1257 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 PDXDC1Q6P996 788 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 CLEC10AQ8IUN9 316 aa18.52■□□□□ 0.56
CMTM3-213ENST00000566756 EEF2KMTQ96G04 330 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms