RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZSCAN22P10073 491 aaPredicted RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 UBA1P22314 1058 aaKnown RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 PLA2G4DQ86XP0 818 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 ZNF710Q8N1W2 664 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 CDHR1Q96JP9 859 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 PKD2L1Q9P0L9 805 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 DDX25Q9UHL0 483 aaKnown RBP13.02□□□□□ -0.33
KARS-207ENST00000566560 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
KARS-207ENST00000566560 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 WNT7AO00755 349 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 ADCY6O43306 1168 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 SLC37A4O43826 429 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 EDIL3O43854 480 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 ARIH2O95376 493 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 F13A1P00488 732 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 CCL5P13501 91 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 ICAM3P32942 547 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 TNFAIP2Q03169 654 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 SEMA3FQ13275 785 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 MTFR1Q15390 333 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 PPP4R3AQ6IN85 833 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 LENG9Q96B70 501 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
KARS-207ENST00000566560 DDX20Q9UHI6 824 aaKnown RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
KARS-207ENST00000566560 CYP3A7-CYP3A51PA0A087WV96 503 aa13□□□□□ -0.33
KARS-207ENST00000566560 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
KARS-207ENST00000566560 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
KARS-207ENST00000566560 MEIS1O00470 390 aa13□□□□□ -0.33
KARS-207ENST00000566560 NKRFO15226 690 aaKnown RBP eCLIP13□□□□□ -0.33
KARS-207ENST00000566560 NEMFO60524 1076 aa13□□□□□ -0.33
KARS-207ENST00000566560 MSCO60682 206 aa13□□□□□ -0.33
KARS-207ENST00000566560 BRD1O95696 1058 aa13□□□□□ -0.33
KARS-207ENST00000566560 ARP10275 920 aa13□□□□□ -0.33
KARS-207ENST00000566560 RARBP10826 455 aa13□□□□□ -0.33
KARS-207ENST00000566560 SMPD1P17405 629 aa13□□□□□ -0.33
KARS-207ENST00000566560 CYP3A7P24462 503 aa13□□□□□ -0.33
KARS-207ENST00000566560 MCM7P33993 719 aa13□□□□□ -0.33
KARS-207ENST00000566560 DDIT3P35638 169 aa13□□□□□ -0.33
KARS-207ENST00000566560 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
KARS-207ENST00000566560 Q4G0T1 1027 aa13□□□□□ -0.33
KARS-207ENST00000566560 DUSP28Q4G0W2 176 aa13□□□□□ -0.33
KARS-207ENST00000566560 GJC2Q5T442 439 aaPredicted RBP13□□□□□ -0.33
KARS-207ENST00000566560 ANO1Q5XXA6 986 aa13□□□□□ -0.33
KARS-207ENST00000566560 IQSEC1Q6DN90 963 aa13□□□□□ -0.33
KARS-207ENST00000566560 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
KARS-207ENST00000566560 TLK2Q86UE8 772 aa13□□□□□ -0.33
KARS-207ENST00000566560 MBOAT7Q96N66 472 aa13□□□□□ -0.33
KARS-207ENST00000566560 RNF208Q9H0X6 261 aa13□□□□□ -0.33
KARS-207ENST00000566560 AGO4Q9HCK5 861 aaKnown RBP13□□□□□ -0.33
KARS-207ENST00000566560 PAK6Q9NQU5 681 aaPredicted RBP13□□□□□ -0.33
KARS-207ENST00000566560 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 MAFGO15525 162 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 SORBS3O60504 671 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 GGPS1O95749 300 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 GH1P01241 217 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 TGFB3P10600 412 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 KCNA2P16389 499 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 PTGS1P23219 599 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
KARS-207ENST00000566560 NUCB2P80303 420 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 SMYD5Q6GMV2 418 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 OR6J1Q8NGC5 347 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 COPS5Q92905 334 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
KARS-207ENST00000566560 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
KARS-207ENST00000566560 IPO5O00410 1097 aaKnown RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 MSH4O15457 936 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 DUSP11O75319 330 aaKnown RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 SP2Q02086 613 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 NEDD9Q14511 834 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 ZNF174Q15697 407 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 CALCRLQ16602 461 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 FAM173BQ6P4H8 233 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 GIMAP8Q8ND71 665 aaPredicted RBP12.98□□□□□ -0.33
KARS-207ENST00000566560 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
KARS-207ENST00000566560 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms