RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 PGM5Q15124 567 aa23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 ADHFE1Q8IWW8 467 aa23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 ENAHQ8N8S7 591 aaPredicted RBP23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 RILPL2Q969X0 211 aa23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 IFIH1Q9BYX4 1025 aaKnown RBP23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 CLDND1Q9NY35 253 aa23.49■■□□□ 1.35
PDXDC1-213ENST00000566426 SMIM10L2AP0DMW4 78 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 SMIM10L2BP0DMW5 78 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 UBA1P22314 1058 aaKnown RBP23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 CCND2P30279 289 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 HOXC8P31273 242 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 USP26Q9BXU7 913 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 RNPEPQ9H4A4 650 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 PCDHA1Q9Y5I3 950 aa23.48■■□□□ 1.35
PDXDC1-213ENST00000566426 C19orf67A6NJJ6 358 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 B4E1Z4 1266 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 NOP56O00567 594 aaKnown RBP23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 OPLAHO14841 1288 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 TREHO43280 583 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 SP2Q02086 613 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 NHLH1Q02575 133 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 UBAC1Q9BSL1 405 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 ZSWIM5Q9P217 1185 aa23.47■■□□□ 1.35
PDXDC1-213ENST00000566426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 ZBTB5O15062 677 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 LGALS2P05162 132 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 RB1P06400 928 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 CTSHP09668 335 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 SDSP20132 328 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 COL4A6Q14031 1691 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 FIBCD1Q8N539 461 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 IL17RAQ96F46 866 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 FBXL18Q96ME1 805 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 POP1Q99575 1024 aaKnown RBP23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 KRT23Q9C075 422 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 LMAN2LQ9H0V9 348 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 RWDD3Q9Y3V2 267 aa23.46■■□□□ 1.35
PDXDC1-213ENST00000566426 KLRF2D3W0D1 207 aa23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 GCOM1H8Y6P7 765 aaPredicted RBP23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 POLR2MP0CAP2 368 aa23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 HOXA13P31271 388 aaPredicted RBP23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 GNPTABQ3T906 1256 aa23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 IFIT1BQ5T764 474 aaKnown RBP23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 RPAINQ86UA6 219 aa23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 MFSD14AQ96MC6 490 aa23.45■■□□□ 1.34
PDXDC1-213ENST00000566426 C5orf67F2Z3F1 127 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 CTNNB1P35222 781 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 NEDD9Q14511 834 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 IMMTQ16891 758 aaKnown RBP23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 STAG2Q8N3U4 1231 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 MTMR8Q96EF0 704 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 C11orf84Q9BUA3 381 aaPredicted RBP23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 CNNM2Q9H8M5 875 aa23.44■■□□□ 1.34
PDXDC1-213ENST00000566426 RBAK-RBAKDNI3L0D1 243 aa23.43■■□□□ 1.34
PDXDC1-213ENST00000566426 IL31RAQ8NI17 732 aa23.43■■□□□ 1.34
PDXDC1-213ENST00000566426 SETD4Q9NVD3 440 aa23.43■■□□□ 1.34
PDXDC1-213ENST00000566426 ZNF215Q9UL58 517 aaPredicted RBP23.43■■□□□ 1.34
PDXDC1-213ENST00000566426 PPP1R11O60927 126 aaPredicted RBP23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 STAM2O75886 525 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 IRS1P35568 1242 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 BMPR1AP36894 532 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 LTBRP36941 435 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 SMAD2Q15796 467 aaKnown RBP23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 CTC1Q2NKJ3 1217 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 METTL7BQ6UX53 244 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 FCHSD1Q86WN1 690 aa23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 GPKOWQ92917 476 aaPredicted RBP eCLIP23.42■■□□□ 1.34
PDXDC1-213ENST00000566426 MYO7AQ13402 2215 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 RALGAPA2Q2PPJ7 1873 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 NLRC5Q86WI3 1866 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 HDAC1Q13547 482 aaPredicted RBP23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 FAM26DQ5JW98 314 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 CWC27Q6UX04 472 aaKnown RBP23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 ZFP91Q96JP5 570 aaPredicted RBP23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 DSCC1Q9BVC3 393 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 OSBPL7Q9BZF2 842 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 DIAPH3Q9NSV4 1193 aa23.41■■□□□ 1.34
PDXDC1-213ENST00000566426 ICAM3P32942 547 aa23.4■■□□□ 1.34
PDXDC1-213ENST00000566426 HFE2Q6ZVN8 426 aa23.4■■□□□ 1.34
PDXDC1-213ENST00000566426 CYFIP1Q7L576 1253 aa23.4■■□□□ 1.34
PDXDC1-213ENST00000566426 HOMER1Q86YM7 354 aa23.4■■□□□ 1.34
PDXDC1-213ENST00000566426 MAD2L2Q9UI95 211 aa23.4■■□□□ 1.34
PDXDC1-213ENST00000566426 LAMA4Q16363 1823 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 PALM3A6NDB9 673 aaPredicted RBP23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 HIP1O00291 1037 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 MBTPS2O43462 519 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 ARHGAP4P98171 946 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 HYAL1Q12794 435 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 HERC4Q5GLZ8 1057 aaPredicted RBP23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 GPR20Q99678 358 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 LNPKQ9C0E8 428 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 BCAS3Q9H6U6 928 aa23.39■■□□□ 1.33
PDXDC1-213ENST00000566426 WDFY4Q6ZS81 3184 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 ADGRA3Q8IWK6 1321 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 NRCAMQ92823 1304 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 SPATA31C2B4DYI2 1134 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 GRM6O15303 877 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 FIBPO43427 364 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 ADAM17P78536 824 aa23.38■■□□□ 1.33
PDXDC1-213ENST00000566426 SMAD4Q13485 552 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms