RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SEPT8Q92599 483 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ZSCAN10Q96SZ4 725 aaPredicted RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 AMNQ9BXJ7 453 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 NSUN3Q9H649 340 aaKnown RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 KAT14Q9H8E8 782 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ZSWIM5Q9P217 1185 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 C17orf102A2RUQ5 167 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 H3BRB1 525 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 KDM4AO75164 1064 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 GGPS1O95749 300 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 LTBRP36941 435 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 PGM5Q15124 567 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 TCEAL5Q5H9L2 206 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 FAM26DQ5JW98 314 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 ADHFE1Q8IWW8 467 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 APBB2Q92870 758 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 ATP6V0A1Q93050 837 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 SPATA33Q96N06 139 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
RNF40-208ENST00000565995 TUT1Q9H6E5 874 aaKnown RBP14.85□□□□□ -0.03
RNF40-208ENST00000565995 H3BQ06 376 aaPredicted RBP14.84□□□□□ -0.03
RNF40-208ENST00000565995 RB1P06400 928 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 LINC00271P0C7V0 271 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 MRE11P49959 708 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 ADAM17P78536 824 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 NHLH1Q02575 133 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 CSPP1Q1MSJ5 1256 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 USP26Q9BXU7 913 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 OSBPL7Q9BZF2 842 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 LMAN2LQ9H0V9 348 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 WDR81Q562E7 1941 aa14.84□□□□□ -0.03
RNF40-208ENST00000565995 EVPLQ92817 2033 aa14.83□□□□□ -0.03
RNF40-208ENST00000565995 RBAK-RBAKDNI3L0D1 243 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 ZBTB5O15062 677 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 TREHO43280 583 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 PPP1R11O60927 126 aaPredicted RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 SMIM10L2AP0DMW4 78 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 SMIM10L2BP0DMW5 78 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 MYCLP12524 364 aaPredicted RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 SDSP20132 328 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 UBA1P22314 1058 aaKnown RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 ICAM3P32942 547 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 SMAD2Q15796 467 aaKnown RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 STAG2Q8N3U4 1231 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 FBXL18Q96ME1 805 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 YME1L1Q96TA2 773 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 VAT1LQ9HCJ6 419 aa14.83□□□□□ -0.04
RNF40-208ENST00000565995 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
RNF40-208ENST00000565995 PALM3A6NDB9 673 aaPredicted RBP14.82□□□□□ -0.04
RNF40-208ENST00000565995 B4E1Z4 1266 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 STAM2O75886 525 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 LGALS2P05162 132 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 CCND2P30279 289 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 TRAF1Q13077 416 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 RPAINQ86UA6 219 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 IL31RAQ8NI17 732 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 CLP1Q92989 425 aaKnown RBP14.82□□□□□ -0.04
RNF40-208ENST00000565995 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
RNF40-208ENST00000565995 MLXIPQ9HAP2 919 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 MAD2L2Q9UI95 211 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 PCDHA1Q9Y5I3 950 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 FRMPD4Q14CM0 1322 aa14.82□□□□□ -0.04
RNF40-208ENST00000565995 MYO10Q9HD67 2058 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 UPP2O95045 317 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 GNAT1P11488 350 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 IRS1P35568 1242 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 BMPR1AP36894 532 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 SEC23AQ15436 765 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 HERC4Q5GLZ8 1057 aaPredicted RBP14.81□□□□□ -0.04
RNF40-208ENST00000565995 GPKOWQ92917 476 aaPredicted RBP eCLIP14.81□□□□□ -0.045e-7■■■■■ 43.5
RNF40-208ENST00000565995 IL17RAQ96F46 866 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 DSCC1Q9BVC3 393 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 KRT23Q9C075 422 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 OSBPL3Q9H4L5 887 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 BCAS3Q9H6U6 928 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 RIOX1Q9H6W3 641 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 EHMT1Q9H9B1 1298 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 RWDD3Q9Y3V2 267 aa14.81□□□□□ -0.04
RNF40-208ENST00000565995 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 SPATA31C2B4DYI2 1134 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 DHX16O60231 1041 aaKnown RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 HOXA13P31271 388 aaPredicted RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 MRPS9P82933 396 aaKnown RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 NEDD9Q14511 834 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 METTL7BQ6UX53 244 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 BMP8AQ7Z5Y6 402 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 FIBCD1Q8N539 461 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 ZNF689Q96CS4 500 aaPredicted RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 UIMC1Q96RL1 719 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 GPR20Q99678 358 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 C11orf84Q9BUA3 381 aaPredicted RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 IFIH1Q9BYX4 1025 aaKnown RBP14.8□□□□□ -0.04
RNF40-208ENST00000565995 CNNM2Q9H8M5 875 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 CLDND1Q9NY35 253 aa14.8□□□□□ -0.04
RNF40-208ENST00000565995 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms