RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 GJB2P29033 226 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 PURAQ00577 322 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 SNX17Q15036 470 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 Q4G0T1 1027 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 SEPT1Q8WYJ6 367 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 FERMT2Q96AC1 680 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 ZFP91Q96JP5 570 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 TOX2Q96NM4 488 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 IGLV3-22A0A075B6J6 115 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 DCDC2CA8MYV0 355 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 H3BQV1 296 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 ARVCFO00192 962 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 ATP9AO75110 1047 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 PTPN11Q06124 597 aaPredicted RBP14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 PRR16Q569H4 304 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 NFRKBQ6P4R8 1299 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 CXCL17Q6UXB2 119 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 PIK3AP1Q6ZUJ8 805 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 CYP2W1Q8TAV3 490 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 MBOAT7Q96N66 472 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 RIT2Q99578 217 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 ZNF577Q9BSK1 485 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
SHCBP1-204ENST00000565887 MYH7BA7E2Y1 1941 aa14.27□□□□□ -0.12
SHCBP1-204ENST00000565887 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 TBX3O15119 743 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 TLR3O15455 904 aaKnown RBP14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 BAG4O95429 457 aaKnown RBP14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 SUPT20HL2P0C7V6 817 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 ARP10275 920 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 TRAPPC10P48553 1259 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 CDK7P50613 346 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 ORC2Q13416 577 aaPredicted RBP14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 ITGA7Q13683 1181 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 INF2Q27J81 1249 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 LETM2Q2VYF4 491 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 ANKRD33Q7Z3H0 272 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 TNFRSF25Q93038 417 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 FAM20AQ96MK3 541 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 GPR20Q99678 358 aa14.27□□□□□ -0.13
SHCBP1-204ENST00000565887 HSP90AA1P07900 732 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 KRT76Q01546 638 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 NR5A1Q13285 461 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 SMAP1Q8IYB5 467 aaPredicted RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 PRKAG2Q9UGJ0 569 aa14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 NOL7Q9UMY1 257 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-204ENST00000565887 H3BRB1 525 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 MARCH6O60337 910 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 DTNBO60941 627 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 ATG7O95352 703 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 F2P00734 622 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 SLC26A2P50443 739 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 RTP1P59025 263 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 SESTD1Q86VW0 696 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 RDM1Q8NG50 284 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 TUT1Q9H6E5 874 aaKnown RBP14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 AZI2Q9H6S1 392 aa14.25□□□□□ -0.13
SHCBP1-204ENST00000565887 MSH4O15457 936 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 DHX15O43143 795 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 EDIL3O43854 480 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 GAS7O60861 476 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 GNAT1P11488 350 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 PTGS1P23219 599 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 SFNP31947 248 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 FOSBP53539 338 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 ACTR2P61160 394 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 ITGB3BPQ13352 177 aaPredicted RBP14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 MIS18BP1Q6P0N0 1132 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 PLPPR4Q7Z2D5 763 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 SLC5A5Q92911 643 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 LENG9Q96B70 501 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 TEKT3Q9BXF9 490 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 ATP11BQ9Y2G3 1177 aa14.24□□□□□ -0.13
SHCBP1-204ENST00000565887 BRCA2P51587 3418 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms