RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 KCNQ1P51787 676 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 IRX6P78412 446 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-213ENST00000565173 IKBKEQ14164 716 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 USP17L6PQ6QN14 398 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 METTL7BQ6UX53 244 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAPN3-213ENST00000565173 ZNF654Q8IZM8 581 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 PIBF1Q8WXW3 757 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 ATP6V0A1Q93050 837 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 NECAB3Q96P71 396 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-213ENST00000565173 GPR20Q99678 358 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 MYL10Q9BUA6 226 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 SPZ1Q9BXG8 430 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-213ENST00000565173 RNPEPQ9H4A4 650 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 NCOR1O75376 2440 aa9.92□□□□□ -0.82
CAPN3-213ENST00000565173 C17orf102A2RUQ5 167 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 RSPH10B2B2RC85 870 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 TREHO43280 583 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 RSPH10BP0C881 870 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 ERVK-21P61565 698 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 ADAM17P78536 824 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 NEDD9Q14511 834 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
CAPN3-213ENST00000565173 GNPTABQ3T906 1256 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 PLEKHG4Q58EX7 1191 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 PCNX4Q63HM2 1172 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 CYFIP1Q7L576 1253 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 CMTR1Q8N1G2 835 aaKnown RBP9.91□□□□□ -0.82
CAPN3-213ENST00000565173 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
CAPN3-213ENST00000565173 SENP7Q9BQF6 1050 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 MTA3Q9BTC8 594 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 LSG1Q9H089 658 aaKnown RBP9.91□□□□□ -0.82
CAPN3-213ENST00000565173 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
CAPN3-213ENST00000565173 EMSYQ7Z589 1322 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 LINC01553A4QN01 128 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 FIBPO43427 364 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 PRC1O43663 620 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 DDAH1O94760 285 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 PLEKHA8P1O95397 391 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 KIF5BP33176 963 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 HTRA4P83105 476 aaPredicted RBP9.9□□□□□ -0.82
CAPN3-213ENST00000565173 NECTIN1Q15223 517 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 AAK1Q2M2I8 961 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 XRRA1Q6P2D8 792 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 TRIM50Q86XT4 487 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 RRP36Q96EU6 259 aaKnown RBP9.9□□□□□ -0.82
CAPN3-213ENST00000565173 SETD4Q9NVD3 440 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 COG5Q9UP83 839 aa9.9□□□□□ -0.82
CAPN3-213ENST00000565173 TCF20Q9UGU0 1960 aaKnown RBP9.9□□□□□ -0.83
CAPN3-213ENST00000565173 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 NOP56O00567 594 aaKnown RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 SH2B2O14492 632 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 SLC27A2O14975 620 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 ATP9AO75110 1047 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 RXRAP19793 462 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 MCM5P33992 734 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 LIFRP42702 1097 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 FAM117BQ6P1L5 589 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 CASC1Q6TDU7 716 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 TMTC2Q8N394 836 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 SMARCC2Q8TAQ2 1214 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 GDPD5Q8WTR4 605 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 HLA-CQ95604 372 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 TOP1MTQ969P6 601 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 TMEM87BQ96K49 555 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 LZTS2Q9BRK4 669 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 INSL6Q9Y581 213 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-213ENST00000565173 DOCK5Q9H7D0 1870 aa9.89□□□□□ -0.83
CAPN3-213ENST00000565173 C5orf42Q9H799 3197 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-213ENST00000565173 GSTTP1A0A1W2PQM5 241 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 hCG_1642624A0A1W2PR95 340 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 CAND2O75155 1236 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 KCNA2P16389 499 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 ITGB5P18084 799 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 COL9A1P20849 921 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 GNAQP50148 359 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 FAM26DQ5JW98 314 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 UTP14CQ5TAP6 766 aaKnown RBP9.88□□□□□ -0.83
CAPN3-213ENST00000565173 CREB3L3Q68CJ9 461 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 RPAINQ86UA6 219 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 IL27Q8NEV9 243 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 CUL5Q93034 780 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 C17orf80Q9BSJ5 609 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 ESYT1Q9BSJ8 1104 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 PSTPIP2Q9H939 334 aa9.88□□□□□ -0.83
CAPN3-213ENST00000565173 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
CAPN3-213ENST00000565173 MICAL3Q7RTP6 2002 aa9.87□□□□□ -0.83
CAPN3-213ENST00000565173 CCDC69A6NI79 296 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms