RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SERINC5Q86VE9 423 aa21.31■■□□□ 1
CLN6-204ENST00000564752 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
CLN6-204ENST00000564752 ARNTL2Q8WYA1 636 aa21.31■■□□□ 1
CLN6-204ENST00000564752 TSPYL2Q9H2G4 693 aaPredicted RBP21.31■■□□□ 1
CLN6-204ENST00000564752 TUT1Q9H6E5 874 aaKnown RBP21.31■■□□□ 1
CLN6-204ENST00000564752 REV3LO60673 3130 aa21.3■■□□□ 1
CLN6-204ENST00000564752 PIK3CDO00329 1044 aa21.3■■□□□ 1
CLN6-204ENST00000564752 MEIS2O14770 477 aa21.3■■□□□ 1
CLN6-204ENST00000564752 GTPBP6O43824 516 aaPredicted RBP21.3■■□□□ 1
CLN6-204ENST00000564752 HOXC8P31273 242 aa21.3■■□□□ 1
CLN6-204ENST00000564752 GNAQP50148 359 aa21.3■■□□□ 1
CLN6-204ENST00000564752 DEFB103AP81534 67 aa21.3■■□□□ 1
CLN6-204ENST00000564752 IKBKEQ14164 716 aa21.3■■□□□ 1
CLN6-204ENST00000564752 XRRA1Q6P2D8 792 aa21.3■■□□□ 1
CLN6-204ENST00000564752 METTL7BQ6UX53 244 aa21.3■■□□□ 1
CLN6-204ENST00000564752 CYFIP1Q7L576 1253 aa21.3■■□□□ 1
CLN6-204ENST00000564752 TMCO2Q7Z6W1 182 aaPredicted RBP21.3■■□□□ 1
CLN6-204ENST00000564752 SRBD1Q8N5C6 995 aaKnown RBP21.3■■□□□ 1
CLN6-204ENST00000564752 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
CLN6-204ENST00000564752 CUL5Q93034 780 aa21.3■■□□□ 1
CLN6-204ENST00000564752 USP26Q9BXU7 913 aa21.3■■□□□ 1
CLN6-204ENST00000564752 C17orf102A2RUQ5 167 aa21.29■■□□□ 1
CLN6-204ENST00000564752 NOP56O00567 594 aaKnown RBP21.29■■□□□ 1
CLN6-204ENST00000564752 FIBPO43427 364 aa21.29■■□□□ 1
CLN6-204ENST00000564752 EFCAB14O75071 495 aa21.29■■□□□ 1
CLN6-204ENST00000564752 PLEKHA8P1O95397 391 aa21.29■■□□□ 1
CLN6-204ENST00000564752 LIFRP42702 1097 aa21.29■■□□□ 1
CLN6-204ENST00000564752 COL9A3Q14050 684 aaPredicted RBP21.29■■□□□ 1
CLN6-204ENST00000564752 PCNX4Q63HM2 1172 aa21.29■■□□□ 1
CLN6-204ENST00000564752 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
CLN6-204ENST00000564752 GPR20Q99678 358 aa21.29■■□□□ 1
CLN6-204ENST00000564752 ZBED2Q9BTP6 218 aa21.29■■□□□ 1
CLN6-204ENST00000564752 RNPEPQ9H4A4 650 aa21.29■■□□□ 1
CLN6-204ENST00000564752 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
CLN6-204ENST00000564752 MYH7BA7E2Y1 1941 aa21.28■■□□□ 1
CLN6-204ENST00000564752 LCHNA4D1U4 455 aa21.28■■□□□ 1
CLN6-204ENST00000564752 RSPH10B2B2RC85 870 aa21.28■■□□□ 1
CLN6-204ENST00000564752 LGR5O75473 907 aa21.28■■□□□ 1
CLN6-204ENST00000564752 GJB5O95377 273 aa21.28■■□□□ 1
CLN6-204ENST00000564752 RSPH10BP0C881 870 aa21.28■■□□□ 1
CLN6-204ENST00000564752 SMIM10L2AP0DMW4 78 aa21.28■■□□□ 1
CLN6-204ENST00000564752 SMIM10L2BP0DMW5 78 aa21.28■■□□□ 1
CLN6-204ENST00000564752 THPOP40225 353 aa21.28■■□□□ 1
CLN6-204ENST00000564752 SPRED2Q7Z698 418 aa21.28■■□□□ 1
CLN6-204ENST00000564752 NEK1Q96PY6 1258 aa21.28■■□□□ 1
CLN6-204ENST00000564752 RAD9AQ99638 391 aa21.28■■□□□ 1
CLN6-204ENST00000564752 SENP7Q9BQF6 1050 aa21.28■■□□□ 1
CLN6-204ENST00000564752 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
CLN6-204ENST00000564752 EMSYQ7Z589 1322 aa21.28■■□□□ 1
CLN6-204ENST00000564752 RBAK-RBAKDNI3L0D1 243 aa21.27■■□□□ 1
CLN6-204ENST00000564752 CALM1P0DP23 149 aa21.27■■□□□ 1
CLN6-204ENST00000564752 CALM2P0DP24 149 aa21.27■■□□□ 1
CLN6-204ENST00000564752 CALM3P0DP25 149 aa21.27■■□□□ 1
CLN6-204ENST00000564752 CMTR1Q8N1G2 835 aaKnown RBP21.27■■□□□ 1
CLN6-204ENST00000564752 SLC12A7Q9Y666 1083 aa21.27■■□□□ 1
CLN6-204ENST00000564752 PRRC2BQ5JSZ5 2229 aaKnown RBP21.27■□□□□ 0.99
CLN6-204ENST00000564752 TCF20Q9UGU0 1960 aaKnown RBP21.27■□□□□ 0.99
CLN6-204ENST00000564752 TREHO43280 583 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 LPXNO60711 386 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 RXRAP19793 462 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 COL9A1P20849 921 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 GRB10Q13322 594 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 KRT32Q14532 448 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 KRT40Q6A162 431 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 NLRX1Q86UT6 975 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 IL27Q8NEV9 243 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 DBF4BQ8NFT6 615 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 ADAMTS19Q8TE59 1207 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 TELO2Q9Y4R8 837 aa21.26■□□□□ 0.99
CLN6-204ENST00000564752 MKRN4PQ13434 485 aaPredicted RBP21.25■□□□□ 0.99
CLN6-204ENST00000564752 SKIV2LQ15477 1246 aaKnown RBP21.25■□□□□ 0.99
CLN6-204ENST00000564752 SETD4Q9NVD3 440 aa21.25■□□□□ 0.99
CLN6-204ENST00000564752 CAND2O75155 1236 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 GNAT1P11488 350 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 BMP1P13497 986 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 TFF2Q03403 129 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 TSGA10IPQ3SY00 556 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 PLEKHG4Q58EX7 1191 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.24■□□□□ 0.99
CLN6-204ENST00000564752 SGMS1Q86VZ5 419 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 MICU3Q86XE3 530 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 RAB11FIP4Q86YS3 637 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 RASEFQ8IZ41 740 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
CLN6-204ENST00000564752 GIMAP8Q8ND71 665 aaPredicted RBP21.24■□□□□ 0.99
CLN6-204ENST00000564752 ADAM17P78536 824 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 AAK1Q2M2I8 961 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 ADCK5Q3MIX3 580 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 UTP14CQ5TAP6 766 aaKnown RBP21.23■□□□□ 0.99
CLN6-204ENST00000564752 TMTC3Q6ZXV5 915 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
CLN6-204ENST00000564752 TRIM50Q86XT4 487 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 CCDC82Q8N4S0 544 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 GPRASP2Q96D09 838 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 UHRF1Q96T88 793 aaPredicted RBP21.23■□□□□ 0.99
CLN6-204ENST00000564752 LMCD1Q9NZU5 365 aa21.23■□□□□ 0.99
CLN6-204ENST00000564752 ZNF215Q9UL58 517 aaPredicted RBP21.23■□□□□ 0.99
CLN6-204ENST00000564752 NCOR1O75376 2440 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms