RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 UBE2ZQ9H832 354 aaPredicted RBP16.33■□□□□ 0.2
CDR2-204ENST00000564542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.32■□□□□ 0.2
CDR2-204ENST00000564542 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
CDR2-204ENST00000564542 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
CDR2-204ENST00000564542 CYTH3O43739 400 aa16.32■□□□□ 0.2
CDR2-204ENST00000564542 STAM2O75886 525 aa16.32■□□□□ 0.2
CDR2-204ENST00000564542 ZFP91Q96JP5 570 aaPredicted RBP16.32■□□□□ 0.2
CDR2-204ENST00000564542 LRFN3Q9BTN0 628 aa16.32■□□□□ 0.2
CDR2-204ENST00000564542 HCN4Q9Y3Q4 1203 aa16.32■□□□□ 0.2
CDR2-204ENST00000564542 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 TREHO43280 583 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 ICAM3P32942 547 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 LEXMQ3ZCV2 418 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 TMEM31Q5JXX7 168 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 METTL7BQ6UX53 244 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 SEPT8Q92599 483 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDR2-204ENST00000564542 SAMD11Q96NU1 681 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 INPP4AQ96PE3 977 aaPredicted RBP16.31■□□□□ 0.2
CDR2-204ENST00000564542 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
CDR2-204ENST00000564542 ARIH1Q9Y4X5 557 aaPredicted RBP16.31■□□□□ 0.2
CDR2-204ENST00000564542 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
CDR2-204ENST00000564542 ERICH2A1L162 156 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
CDR2-204ENST00000564542 CYP21A2P08686 494 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
CDR2-204ENST00000564542 TROAPQ12815 778 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 NEDD9Q14511 834 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
CDR2-204ENST00000564542 PTPROQ16827 1216 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 MRPL38Q96DV4 380 aaKnown RBP16.3■□□□□ 0.2
CDR2-204ENST00000564542 RNPEPQ9H4A4 650 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 DOCK5Q9H7D0 1870 aa16.3■□□□□ 0.2
CDR2-204ENST00000564542 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 BAZ2BQ9UIF8 2168 aaKnown RBP16.29■□□□□ 0.2
CDR2-204ENST00000564542 SPATA31C2B4DYI2 1134 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 FIBPO43427 364 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 GPR37L1O60883 481 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 CTSHP09668 335 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 GNAT1P11488 350 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
CDR2-204ENST00000564542 KCNA5P22460 613 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 SEMA3FQ13275 785 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 WTAPQ15007 396 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 EPC2Q52LR7 807 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
CDR2-204ENST00000564542 TOP1MTQ969P6 601 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 GPR20Q99678 358 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 SENP2Q9HC62 589 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 CD320Q9NPF0 282 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 C11orf16Q9NQ32 467 aa16.29■□□□□ 0.2
CDR2-204ENST00000564542 ZNF215Q9UL58 517 aaPredicted RBP16.29■□□□□ 0.2
CDR2-204ENST00000564542 PI4K2BG5E9Z4 385 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 TRIM50Q86XT4 487 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 NCOA7Q8NI08 942 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.28■□□□□ 0.2
CDR2-204ENST00000564542 EXOC6Q8TAG9 804 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 APBB2Q92870 758 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 SETD4Q9NVD3 440 aa16.28■□□□□ 0.2
CDR2-204ENST00000564542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.27■□□□□ 0.2
CDR2-204ENST00000564542 E7EWF7 191 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 H3BNC9 293 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 ADAM17P78536 824 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 PTH1RQ03431 593 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 FAM178BQ8IXR5 827 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 LMBR1Q8WVP7 490 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 RUFY2Q8WXA3 655 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
CDR2-204ENST00000564542 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
CDR2-204ENST00000564542 UPP2O95045 317 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 IL9P15248 144 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
CDR2-204ENST00000564542 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 PTCRAQ6ISU1 281 aaPredicted RBP16.26■□□□□ 0.19
CDR2-204ENST00000564542 XRRA1Q6P2D8 792 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 GJD3Q8N144 294 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 TAF6LQ9Y6J9 622 aa16.26■□□□□ 0.19
CDR2-204ENST00000564542 NRCAMQ92823 1304 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 FAM86C2PA6NEL3 165 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 GRXCR2A6NFK2 248 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 PDE4AP27815 886 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
CDR2-204ENST00000564542 ANTXR2P58335 489 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 ARHGAP4P98171 946 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 GPM6BQ13491 265 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms