RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 FAAP100Q0VG06 881 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 NFRKBQ6P4R8 1299 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 CYFIP1Q7L576 1253 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 VTI1AQ96AJ9 217 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 GPR20Q99678 358 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 PDLIM7Q9NR12 457 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 NFASCO94856 1347 aa19.72■□□□□ 0.75
USB1-209ENST00000564387 CYP3A7-CYP3A51PA0A087WV96 503 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 ARP10275 920 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 CYP3A7P24462 503 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 PSMC6P62333 389 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 HMGN5P82970 282 aaKnown RBP19.71■□□□□ 0.75
USB1-209ENST00000564387 PTPN11Q06124 597 aaPredicted RBP19.71■□□□□ 0.75
USB1-209ENST00000564387 SESTD1Q86VW0 696 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 TNFRSF25Q93038 417 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 LENG9Q96B70 501 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 TMX3Q96JJ7 454 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 C16orf70Q9BSU1 422 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 PRO3102Q9H379 93 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 AGO4Q9HCK5 861 aaKnown RBP19.71■□□□□ 0.75
USB1-209ENST00000564387 DOCK5Q9H7D0 1870 aa19.71■□□□□ 0.75
USB1-209ENST00000564387 DCDC2CA8MYV0 355 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 KIAA0355O15063 1070 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 TBCKQ8TEA7 893 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 MBOAT7Q96N66 472 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 TBX21Q9UL17 535 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 TELO2Q9Y4R8 837 aa19.7■□□□□ 0.74
USB1-209ENST00000564387 TRIM43BA6NCK2 446 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 DHX15O43143 795 aaKnown RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 PQBP1O60828 265 aaKnown RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 MMP1P03956 469 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 CLTBP09497 229 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 ZNF76P36508 570 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 SETQ01105 290 aaPredicted RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 ITGB3BPQ13352 177 aaPredicted RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 MOXD1Q6UVY6 613 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 SH3RF1Q7Z6J0 888 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 OXER1Q8TDS5 423 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 TRIM43Q96BQ3 446 aaPredicted RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 GDF15Q99988 308 aa19.69■□□□□ 0.74
USB1-209ENST00000564387 ZMYND8Q9ULU4 1186 aaPredicted RBP19.69■□□□□ 0.74
USB1-209ENST00000564387 RANBP2P49792 3224 aaKnown RBP19.68■□□□□ 0.74
USB1-209ENST00000564387 LTBP2Q14767 1821 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 GSTTP1A0A1W2PQM5 241 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 SORBS3O60504 671 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
USB1-209ENST00000564387 KRT40Q6A162 431 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 KATNAL1Q9BW62 490 aa19.68■□□□□ 0.74
USB1-209ENST00000564387 NOP56O00567 594 aaKnown RBP19.67■□□□□ 0.74
USB1-209ENST00000564387 ATG7O95352 703 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 LGALS2P05162 132 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 SYN1P17600 705 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 BMP8BP34820 402 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 Q4G0T1 1027 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 SEPT1Q8WYJ6 367 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 JPH1Q9HDC5 661 aaPredicted RBP19.67■□□□□ 0.74
USB1-209ENST00000564387 SLC9A2Q9UBY0 812 aa19.67■□□□□ 0.74
USB1-209ENST00000564387 H3BRB1 525 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 IPO5O00410 1097 aaKnown RBP19.66■□□□□ 0.74
USB1-209ENST00000564387 TLR3O15455 904 aaKnown RBP19.66■□□□□ 0.74
USB1-209ENST00000564387 B4GALT4O60513 344 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 ZNF286BP0CG31 522 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 ITGB8P26012 769 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 HOXC8P31273 242 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 KRT2P35908 639 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 PSEN2P49810 448 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 MFSD10Q14728 455 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 TRPV6Q9H1D0 765 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 TUT1Q9H6E5 874 aaKnown RBP19.66■□□□□ 0.74
USB1-209ENST00000564387 TMEM39AQ9NV64 488 aa19.66■□□□□ 0.74
USB1-209ENST00000564387 CCDC194A0A1B0GVG4 234 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 LGR5O75473 907 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 NR5A1Q13285 461 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 INF2Q27J81 1249 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 KIAA0753Q2KHM9 967 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 PRR16Q569H4 304 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 EARS2Q5JPH6 523 aaKnown RBP19.65■□□□□ 0.74
USB1-209ENST00000564387 PPP4R3AQ6IN85 833 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 CTAGE1Q96RT6 745 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 TBC1D22BQ9NU19 505 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 PRKAG2Q9UGJ0 569 aa19.65■□□□□ 0.74
USB1-209ENST00000564387 IGKV6D-21A0A0A0MT36 114 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 BTBD18B2RXH4 712 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 MSH4O15457 936 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 CCNE2O96020 404 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 TIMP1P01033 207 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 SUPT20HL2P0C7V6 817 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 TCF7P36402 384 aaPredicted RBP19.64■□□□□ 0.73
USB1-209ENST00000564387 MAGEA10P43363 369 aaPredicted RBP19.64■□□□□ 0.73
USB1-209ENST00000564387 ACTR2P61160 394 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 CUL4AQ13619 759 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 TRIM29Q14134 588 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 NEK8Q86SG6 692 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 DIS3L2Q8IYB7 885 aaKnown RBP19.64■□□□□ 0.73
USB1-209ENST00000564387 SLC5A5Q92911 643 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms