RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 E9PMD0 336 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 CSRNP1Q96S65 589 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 TRIM9Q9C026 710 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 AGPAT5Q9NUQ2 364 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 HYOU1Q9Y4L1 999 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 SFI1A8K8P3 1242 aa11.46□□□□□ -0.58
RNF40-204ENST00000563683 PLA2G4BP0C869 781 aa11.46□□□□□ -0.58
RNF40-204ENST00000563683 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.58
RNF40-204ENST00000563683 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.58
RNF40-204ENST00000563683 ADAMTS1Q9UHI8 967 aa11.46□□□□□ -0.58
RNF40-204ENST00000563683 FLOT1O75955 427 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 KIF11P52732 1056 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SKOR1P84550 965 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 DLGAP5Q15398 846 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 PRR5LQ6MZQ0 368 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 PEX26Q7Z412 305 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 ADSSL1Q8N142 457 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 UBLCP1Q8WVY7 318 aaPredicted RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 CHUKO15111 745 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 FSBPO95073 299 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 NEFHP12036 1026 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 TCP1P17987 556 aaKnown RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 GJC1P36383 396 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SLC7A5Q01650 507 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 EMBQ6PCB8 327 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 ADAT2Q7Z6V5 191 aaKnown RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 IFT20Q8IY31 132 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SLFN12Q8IYM2 578 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SH3GL2Q99962 352 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SUFUQ9UMX1 484 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 C4AP0C0L4 1744 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 C4BP0C0L5 1744 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 GNA14O95837 355 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 FTCDO95954 541 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 EPHB4P54760 987 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 NEDD9Q14511 834 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SH3RF1Q7Z6J0 888 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 SLIT3O75094 1523 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SPATA31A5Q5VU36 1347 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 SPATA31A7Q8IWB4 1347 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 APBA1Q02410 837 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 EXOC3L4Q17RC7 722 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 KCNV1Q6PIU1 500 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 UNC13DQ70J99 1090 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 CCSER1Q9C0I3 900 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 RIC8AQ9NPQ8 531 aa11.45□□□□□ -0.58
RNF40-204ENST00000563683 TRPC5Q9UL62 973 aaPredicted RBP11.45□□□□□ -0.58
RNF40-204ENST00000563683 FLT1P17948 1338 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 STXBP3O00186 592 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 MMP10P09238 476 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 CCDC25Q86WR0 208 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 JPH2Q9BR39 696 aaPredicted RBP11.44□□□□□ -0.58
RNF40-204ENST00000563683 PCDHA13Q9Y5I0 950 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 FAM205AQ6ZU69 1335 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 POTEB3A0JP26 581 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 POTECB2RU33 542 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 STAT1P42224 750 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 ITIH3Q06033 890 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 SEPT2Q15019 361 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 POTEBQ6S5H4 581 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 YTHDF3Q7Z739 585 aaKnown RBP11.44□□□□□ -0.58
RNF40-204ENST00000563683 GSPT2Q8IYD1 628 aaKnown RBP11.44□□□□□ -0.58
RNF40-204ENST00000563683 TBC1D16Q8TBP0 767 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 TCHPQ9BT92 498 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 BHMT2Q9H2M3 363 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 PI4KBQ9UBF8 816 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 BACH1O14867 736 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 NF2P35240 595 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 IQCDQ96DY2 449 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 ANO3Q9BYT9 981 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
RNF40-204ENST00000563683 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 A0A1W2PQC6 194 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 LRRC53A6NM62 1247 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 ZBTB5O15062 677 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 GCFC2P16383 781 aaKnown RBP11.43□□□□□ -0.58
RNF40-204ENST00000563683 STAT3P40763 770 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 KLK7P49862 253 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 GUCY2DQ02846 1103 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms