RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
HERPUD1-205ENST00000562914 H3BNC9 293 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 NOP56O00567 594 aaKnown RBP18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 ICAM3P32942 547 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 TRDNQ13061 729 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 SEC23AQ15436 765 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 EPC2Q52LR7 807 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 C11orf16Q9NQ32 467 aa18.25■□□□□ 0.51
HERPUD1-205ENST00000562914 MYH7BA7E2Y1 1941 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 NCK2O43639 380 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 PPP1R11O60927 126 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 LGALS2P05162 132 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 SMIM10L2AP0DMW4 78 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 SMIM10L2BP0DMW5 78 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 SP2Q02086 613 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 NUCB1Q02818 461 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 HIC1Q14526 733 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 METTL7BQ6UX53 244 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 CD320Q9NPF0 282 aa18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-205ENST00000562914 MICAL3Q7RTP6 2002 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 ERICH2A1L162 156 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 PABPC5Q96DU9 382 aaKnown RBP18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 RNPEPQ9H4A4 650 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 PRKAG3Q9UGI9 489 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
HERPUD1-205ENST00000562914 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 TREHO43280 583 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 FIBPO43427 364 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 SSTR3P32745 418 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 GPM6BQ13491 265 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 GRM4Q14833 912 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 COL19A1Q14993 1142 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 TMEM192Q8IY95 271 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 NSUN3Q9H649 340 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 RWDD3Q9Y3V2 267 aa18.22■□□□□ 0.51
HERPUD1-205ENST00000562914 BRWD1Q9NSI6 2320 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 RB1P06400 928 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 IL9P15248 144 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 FAM26DQ5JW98 314 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 PIGSQ96S52 555 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 NRCAMQ92823 1304 aa18.21■□□□□ 0.51
HERPUD1-205ENST00000562914 SORBS3O60504 671 aa18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 GPR20Q99678 358 aa18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 KCNH6Q9H252 994 aa18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-205ENST00000562914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 FAM86C2PA6NEL3 165 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 C5orf67F2Z3F1 127 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 ADAM17P78536 824 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 MRPS9P82933 396 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 CYFIP1Q7L576 1253 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 GPKOWQ92917 476 aaPredicted RBP eCLIP18.19■□□□□ 0.53e-11■■■■■ 35.9
HERPUD1-205ENST00000562914 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 C11orf84Q9BUA3 381 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-205ENST00000562914 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 DCXO43602 365 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 UPP2O95045 317 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 CTSHP09668 335 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 TROAPQ12815 778 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 PCNX4Q63HM2 1172 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 NLRX1Q86UT6 975 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 CUL5Q93034 780 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 UPF3BQ9BZI7 483 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 SETD4Q9NVD3 440 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 RALGAPA2Q2PPJ7 1873 aa18.18■□□□□ 0.5
HERPUD1-205ENST00000562914 CYTH3O43739 400 aa18.17■□□□□ 0.5
HERPUD1-205ENST00000562914 WTAPQ15007 396 aa18.17■□□□□ 0.5
HERPUD1-205ENST00000562914 TCEAL5Q5H9L2 206 aa18.17■□□□□ 0.5
HERPUD1-205ENST00000562914 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
HERPUD1-205ENST00000562914 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-205ENST00000562914 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms