RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 USP33Q8TEY7 942 aa7.73□□□□□ -1.17
CHD9-205ENST00000562785 CRTAC1Q9NQ79 661 aa7.73□□□□□ -1.17
CHD9-205ENST00000562785 CATSPERZQ9NTU4 200 aa7.73□□□□□ -1.17
CHD9-205ENST00000562785 GPR160Q9UJ42 338 aa7.73□□□□□ -1.17
CHD9-205ENST00000562785 CFAP43Q8NDM7 1665 aa7.73□□□□□ -1.17
CHD9-205ENST00000562785 PCF11O94913 1555 aaKnown RBP7.72□□□□□ -1.17
CHD9-205ENST00000562785 HECW1Q76N89 1606 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 SRGAP3O43295 1099 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 DGKIO75912 1065 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 F2P00734 622 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 PNLIPP16233 465 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 CPEP16870 476 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 SLC6A11P48066 632 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 CDKN1CP49918 316 aaPredicted RBP7.72□□□□□ -1.17
CHD9-205ENST00000562785 DSG1Q02413 1049 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 STRN3Q13033 797 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 CRY1Q16526 586 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 EMC4Q5J8M3 183 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 ARTNQ5T4W7 220 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 CABP7Q86V35 215 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 PRPF38AQ8NAV1 312 aaKnown RBP7.72□□□□□ -1.17
CHD9-205ENST00000562785 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 OR2W6PQ8NHA6 318 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHD9-205ENST00000562785 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 CABP5Q9NP86 173 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 B4GALT6Q9UBX8 382 aa7.72□□□□□ -1.17
CHD9-205ENST00000562785 SHROOM2Q13796 1616 aa7.71□□□□□ -1.17
CHD9-205ENST00000562785 NTRK1P04629 796 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 PDE6AP16499 860 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 BPIP17213 487 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 GPR19Q15760 415 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 SKOR2Q2VWA4 1001 aaPredicted RBP7.71□□□□□ -1.18
CHD9-205ENST00000562785 OTOP1Q7RTM1 612 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 PIP4K2CQ8TBX8 421 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD9-205ENST00000562785 SMURF1Q9HCE7 757 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 MAP3K1Q13233 1512 aa7.71□□□□□ -1.18
CHD9-205ENST00000562785 CARMIL2Q6F5E8 1435 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 CLASP1Q7Z460 1538 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 A0A1W2PQJ5 194 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 TCRBV5S4A2TA0A5A2 114 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 ZNF891A8MT65 544 aaPredicted RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 BRINP1O60477 761 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 AMY2AP04746 511 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 AMY2BP19961 511 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 CDK11BP21127 795 aaKnown RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 ARL4AP40617 200 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 SCNN1BP51168 640 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 GP2P55259 537 aaKnown RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 ARHGAP44Q17R89 818 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 BICRALQ6AI39 1079 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 DCP2Q8IU60 420 aaKnown RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 UHMK1Q8TAS1 419 aaKnown RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 RNF32Q9H0A6 362 aa7.7□□□□□ -1.18
CHD9-205ENST00000562785 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
CHD9-205ENST00000562785 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 KRIT1O00522 736 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 NKRFO15226 690 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHD9-205ENST00000562785 GAS7O60861 476 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 DBHP09172 617 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 COL6A2P12110 1019 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 YBX3P16989 372 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHD9-205ENST00000562785 AFMP43652 599 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 JAM2P57087 298 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 ERVFRD-1P60508 538 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 CHRNA2Q15822 529 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 HHIPL2Q6UWX4 724 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 ARHGAP36Q6ZRI8 547 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 CBLL1Q75N03 491 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 OSTM1Q86WC4 334 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 NXPE1Q8N323 547 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 C2orf69Q8N8R5 385 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 ATL2Q8NHH9 583 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 ABHD4Q8TB40 342 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 USP7Q93009 1102 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 TTC1Q99614 292 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 IFT22Q9H7X7 185 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 YBX2Q9Y2T7 364 aaKnown RBP7.69□□□□□ -1.18
CHD9-205ENST00000562785 FHOD3Q2V2M9 1422 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 CASKIN1Q8WXD9 1431 aa7.69□□□□□ -1.18
CHD9-205ENST00000562785 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 TIAM1Q13009 1591 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 PTPDC1A2A3K4 754 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 ZEB2O60315 1214 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 CYBBP04839 570 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 PMLP29590 882 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 GALK1P51570 392 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 STAT4Q14765 748 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 FIGNQ5HY92 759 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 SH3RF2Q8TEC5 729 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 SEC14L1Q92503 715 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 BOCQ9BWV1 1114 aa7.68□□□□□ -1.18
CHD9-205ENST00000562785 DDX56Q9NY93 547 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms