RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 G3BP2Q9UN86 482 aaKnown RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 ROBO3Q96MS0 1386 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 FAM205CA6NFA0 338 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 PRPF3O43395 683 aaKnown RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 KIF4AO95239 1232 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 IDEP14735 1019 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 XBP1P17861 261 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 GTF2IP78347 998 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 BYSLQ13895 437 aaKnown RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 PPP1R7Q15435 360 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 RILPL1Q5EBL4 403 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 SPATA1Q5VX52 437 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 MMGT1Q8N4V1 131 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 KLHL23Q8NBE8 558 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 HVCN1Q96D96 273 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 RTFDC1Q9BY42 306 aaPredicted RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
CLK3-206ENST00000562078 PCDHB6Q9Y5E3 794 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 PCDHGC5Q9Y5F6 944 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 ADAMTSL1Q8N6G6 1762 aa14.64□□□□□ -0.07
CLK3-206ENST00000562078 FAM153BP0C7A2 387 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 ERCC5P28715 1186 aaPredicted RBP14.63□□□□□ -0.07
CLK3-206ENST00000562078 FAM153CQ494X1 144 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 MFSD14BQ5SR56 506 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 CFAP58Q5T655 872 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 EMC10Q5UCC4 262 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 SLC30A9Q6PML9 568 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 SMYD4Q8IYR2 804 aaPredicted RBP14.63□□□□□ -0.07
CLK3-206ENST00000562078 IQCKQ8N0W5 287 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 KRI1Q8N9T8 703 aaKnown RBP14.63□□□□□ -0.07
CLK3-206ENST00000562078 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 TRIM58Q8NG06 486 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 TCP11Q8WWU5 503 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 CAVIN3Q969G5 261 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 SEC16BQ96JE7 1060 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 FAM153AQ9UHL3 310 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 DUSP10Q9Y6W6 482 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 SYNRGQ9UMZ2 1314 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 GMNCA6NCL1 334 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 RCCD1A6NED2 376 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 FESP07332 822 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 LDHCP07864 332 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 BTDP43251 543 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 TFAP4Q01664 338 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 CDKAL1Q5VV42 579 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 IQCEQ6IPM2 695 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 CREG2Q8IUH2 290 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 SRBD1Q8N5C6 995 aaKnown RBP14.63□□□□□ -0.07
CLK3-206ENST00000562078 PHF20Q9BVI0 1012 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 LACRTQ9GZZ8 138 aa14.63□□□□□ -0.07
CLK3-206ENST00000562078 DNAJC8O75937 253 aaPredicted RBP14.62□□□□□ -0.07
CLK3-206ENST00000562078 KRT2P35908 639 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 PPP4CP60510 307 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 LACTB2Q53H82 288 aaPredicted RBP14.62□□□□□ -0.07
CLK3-206ENST00000562078 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 PIK3R5Q8WYR1 880 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 ATP6V1G3Q96LB4 118 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 CTAGE1Q96RT6 745 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 LMCD1Q9NZU5 365 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 STIM2Q9P246 746 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 ITIH6Q6UXX5 1313 aa14.62□□□□□ -0.07
CLK3-206ENST00000562078 AHCYL1O43865 530 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 DIAPH2O60879 1101 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 CLTAP09496 248 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 LAMB3Q13751 1172 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 GNPTABQ3T906 1256 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
CLK3-206ENST00000562078 SPATA4Q8NEY3 305 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 PAIP2Q9BPZ3 127 aaKnown RBP14.61□□□□□ -0.07
CLK3-206ENST00000562078 ZCWPW1Q9H0M4 648 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 VPS16Q9H269 839 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 DBNDD1Q9H9R9 158 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 EHD2Q9NZN4 543 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 FBXO2Q9UK22 296 aaPredicted RBP14.61□□□□□ -0.07
CLK3-206ENST00000562078 MACROD2A1Z1Q3 448 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 N4BP3O15049 544 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 COQ9O75208 318 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 EARS2Q5JPH6 523 aaKnown RBP14.61□□□□□ -0.07
CLK3-206ENST00000562078 HAUS3Q68CZ6 603 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 CWF19L1Q69YN2 538 aaKnown RBP14.61□□□□□ -0.07
CLK3-206ENST00000562078 C7orf43Q8WVR3 580 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 CCT6BQ92526 530 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
CLK3-206ENST00000562078 USP17L3A6NCW0 530 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 USP17L4A6NCW7 530 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 TMOD1P28289 359 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 CASP1P29466 404 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 PAPOLAP51003 745 aaKnown RBP14.6□□□□□ -0.07
CLK3-206ENST00000562078 USP17L1Q7RTZ2 530 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 CACNA2D3Q8IZS8 1091 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 EZH1Q92800 747 aaPredicted RBP14.6□□□□□ -0.07
CLK3-206ENST00000562078 PSMB7Q99436 277 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 FAM167BQ9BTA0 163 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 FAM205AQ6ZU69 1335 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 ESYT3A0FGR9 886 aa14.6□□□□□ -0.07
CLK3-206ENST00000562078 TRAPPC3O43617 180 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms