RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 GJB1P08034 283 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 DDIT3P35638 169 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 SETQ01105 290 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-221ENST00000561276 NEDD9Q14511 834 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 NBR1Q14596 966 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 CELF3Q5SZQ8 465 aaKnown RBP11.65□□□□□ -0.54
LRRC28-221ENST00000561276 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 CYFIP1Q7L576 1253 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 GIMAP8Q8ND71 665 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-221ENST00000561276 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 XPNPEP3Q9NQH7 507 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 ZDHHC9Q9Y397 364 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
LRRC28-221ENST00000561276 DHX15O43143 795 aaKnown RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 MARCH6O60337 910 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 BAG4O95429 457 aaKnown RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 PGK1P00558 417 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 TFRCP02786 760 aaKnown RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 KCNA2P16389 499 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 GJA9P57773 515 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 ARHGAP1Q07960 439 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 ITGB3BPQ13352 177 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 TLK2Q86UE8 772 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 U2AF1L4Q8WU68 220 aaKnown RBP11.64□□□□□ -0.55
LRRC28-221ENST00000561276 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 GJA10Q969M2 543 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 ABHD8Q96I13 439 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 FAM20AQ96MK3 541 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 TBC1D22BQ9NU19 505 aa11.64□□□□□ -0.55
LRRC28-221ENST00000561276 NFASCO94856 1347 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 SYNRGQ9UMZ2 1314 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 TCHHQ07283 1943 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 TBX3O15119 743 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 NEMFO60524 1076 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 FARP2O94887 1054 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 TXKP42681 527 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 GJA8P48165 433 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 NUCB2P80303 420 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 BEX3Q00994 111 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 ORC2Q13416 577 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 HSDL1Q3SXM5 330 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 GNASQ5JWF2 1037 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 OR6J1Q8NGC5 347 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 HAS1Q92839 578 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 SPATA33Q96N06 139 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 RIT2Q99578 217 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 CRISPLD2Q9H0B8 497 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 SPC25Q9HBM1 224 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
LRRC28-221ENST00000561276 OGDHLQ9ULD0 1010 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
LRRC28-221ENST00000561276 A6NJR5 290 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 CTAGE5O15320 804 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 GAS7O60861 476 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 ADAMTS4O75173 837 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 PSMD10O75832 226 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 NKX3-2P78367 333 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 SP4Q02446 784 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 PTGDRQ13258 359 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 LRRC41Q15345 812 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 CALCRLQ16602 461 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
LRRC28-221ENST00000561276 FOXD4L6Q3SYB3 417 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-221ENST00000561276 LRCH2Q5VUJ6 765 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 METTL7BQ6UX53 244 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 FOXD4L3Q6VB84 417 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-221ENST00000561276 RNF180Q86T96 592 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 KLHDC9Q8NEP7 349 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 AFG1LQ8WV93 481 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-221ENST00000561276 MTMR9Q96QG7 549 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 TMEM60Q9H2L4 133 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 TFIP11Q9UBB9 837 aaKnown RBP11.62□□□□□ -0.55
LRRC28-221ENST00000561276 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 TELO2Q9Y4R8 837 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 CLIC4Q9Y696 253 aa11.62□□□□□ -0.55
LRRC28-221ENST00000561276 GSTTP1A0A1W2PQM5 241 aa11.61□□□□□ -0.55
LRRC28-221ENST00000561276 MYADML2A6NDP7 307 aa11.61□□□□□ -0.55
LRRC28-221ENST00000561276 CCDC85CA6NKD9 419 aa11.61□□□□□ -0.55
LRRC28-221ENST00000561276 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
LRRC28-221ENST00000561276 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
LRRC28-221ENST00000561276 CPT1AP50416 773 aa11.61□□□□□ -0.55
LRRC28-221ENST00000561276 CEBPZQ03701 1054 aaKnown RBP11.61□□□□□ -0.55
LRRC28-221ENST00000561276 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms