RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 CAMTA1Q9Y6Y1 1673 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 CACNA1FO60840 1977 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SH3D21A4FU49 640 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 WTIPA6NIX2 430 aaPredicted RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 SIPA1L3O60292 1781 aaPredicted RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 DIAPH1O60610 1272 aaKnown RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 RTP1P59025 263 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 HDLBPQ00341 1268 aaKnown RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 CDCP2Q5VXM1 449 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 Q8N1X5 172 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 TCP11L2Q8N4U5 519 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 CFAP53Q96M91 514 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 CDK5RAP1Q96SZ6 601 aaKnown RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 DPH2Q9BQC3 489 aaPredicted RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
AP4E1-204ENST00000561004 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 GMIPQ9P107 970 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 IRS2Q9Y4H2 1338 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 PCDHB14Q9Y5E9 798 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 NCOA3Q9Y6Q9 1424 aa6.12□□□□□ -1.43
AP4E1-204ENST00000561004 LTBP4Q8N2S1 1624 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 PXDNQ92626 1479 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 DCCP43146 1447 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 CHURC1-FNTBB4DL54 471 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 MSL3P1P0C860 447 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 U2AF1L5P0DN76 240 aaPredicted RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 IGFBP6P24592 240 aaPredicted RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 IRX6P78412 446 aaPredicted RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 U2AF1Q01081 240 aaKnown RBP eCLIP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 SLFN5Q08AF3 891 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 NR1I3Q14994 352 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 NT5DC4Q86YG4 428 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 DDX17Q92841 729 aaKnown RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
AP4E1-204ENST00000561004 TAF6LQ9Y6J9 622 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 PMF1-BGLAPU3KQ54 211 aa6.11□□□□□ -1.43
AP4E1-204ENST00000561004 MAP3K19Q56UN5 1328 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 RGS13O14921 159 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
AP4E1-204ENST00000561004 PPM1GO15355 546 aaPredicted RBP6.1□□□□□ -1.43
AP4E1-204ENST00000561004 NOBOXO60393 691 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 IMPDH2P12268 514 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 CCNFP41002 786 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 CLCQ05315 142 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 EIF4A2Q14240 407 aaKnown RBP6.1□□□□□ -1.43
AP4E1-204ENST00000561004 VWA3BQ502W6 1294 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 HSP90AB2PQ58FF8 381 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 SAPCD2Q86UD0 394 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 FNIP1Q8TF40 1166 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 PHACTR3Q96KR7 559 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 TNFRSF10DQ9UBN6 386 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.1□□□□□ -1.43
AP4E1-204ENST00000561004 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 DUSP10Q9Y6W6 482 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 SCN11AQ9UI33 1791 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 LMO7Q8WWI1 1683 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
AP4E1-204ENST00000561004 ROBO1Q9Y6N7 1651 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 LRRC37A3O60309 1634 aa6.1□□□□□ -1.43
AP4E1-204ENST00000561004 SHANK3Q9BYB0 1731 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 MEIS3P2A8K0S8 358 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 DNAJA2O60884 412 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 PLATP00750 562 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 HMOX1P09601 288 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 MCM4P33991 863 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 TMPOP42166 694 aaKnown RBP6.09□□□□□ -1.43
AP4E1-204ENST00000561004 LIMS1P48059 325 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 ZC3H14Q6PJT7 736 aaKnown RBP6.09□□□□□ -1.43
AP4E1-204ENST00000561004 KRT28Q7Z3Y7 464 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 RASGRP4Q8TDF6 673 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 TGIF2Q9GZN2 237 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 VPS11Q9H270 941 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 KLHL3Q9UH77 587 aa6.09□□□□□ -1.43
AP4E1-204ENST00000561004 KDM3BQ7LBC6 1761 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 SBNO1A3KN83 1393 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 EFEMP2O95967 443 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 ENDOUP21128 410 aaKnown RBP6.08□□□□□ -1.44
AP4E1-204ENST00000561004 PCBP3P57721 371 aaKnown RBP6.08□□□□□ -1.44
AP4E1-204ENST00000561004 TGFB2P61812 414 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 RAD51AP2Q09MP3 1159 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 SMN1Q16637 294 aaKnown RBP6.08□□□□□ -1.44
AP4E1-204ENST00000561004 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
AP4E1-204ENST00000561004 GK5Q6ZS86 529 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 SPRED1Q7Z699 444 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 ATG4CQ96DT6 458 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
AP4E1-204ENST00000561004 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 FAN1Q9Y2M0 1017 aa6.08□□□□□ -1.44
AP4E1-204ENST00000561004 WNK3Q9BYP7 1800 aa6.07□□□□□ -1.44
AP4E1-204ENST00000561004 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
AP4E1-204ENST00000561004 RAG1P15918 1043 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms