RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 USP26Q9BXU7 913 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
TPM1-227ENST00000560970 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 ZBTB5O15062 677 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 GGPS1O95749 300 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 RXRAP19793 462 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 CCND2P30279 289 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 PGM5Q15124 567 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 WNT8BQ93098 351 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 HLA-CQ95604 372 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
TPM1-227ENST00000560970 MTA3Q9BTC8 594 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 LMCD1Q9NZU5 365 aa12.39□□□□□ -0.43
TPM1-227ENST00000560970 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 CYTH3O43739 400 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 LGR5O75473 907 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 RGS20O76081 388 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 DDAH1O94760 285 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 SEC24BO95487 1268 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 PLA2G5P39877 138 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 ERVK-21P61565 698 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 TRAF1Q13077 416 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 IKBKEQ14164 716 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 KRT32Q14532 448 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 MBTPS1Q14703 1052 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 TCTN1Q2MV58 587 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 HSDL1Q3SXM5 330 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 MYSM1Q5VVJ2 828 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 SPATA33Q96N06 139 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
TPM1-227ENST00000560970 RAD9AQ99638 391 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 MTUS1Q9ULD2 1270 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
TPM1-227ENST00000560970 WDR81Q562E7 1941 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 SORBS3O60504 671 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 PPFIA4O75335 1185 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 AMHP03971 560 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 HOXC8P31273 242 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
TPM1-227ENST00000560970 LIFRP42702 1097 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
TPM1-227ENST00000560970 GNPTABQ3T906 1256 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 C8orf34Q49A92 452 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 PLXNA4Q9HCM2 1894 aa12.37□□□□□ -0.43
TPM1-227ENST00000560970 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
TPM1-227ENST00000560970 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
TPM1-227ENST00000560970 CAND2O75155 1236 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 LGALS2P05162 132 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 TGFB3P10600 412 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 THPOP40225 353 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
TPM1-227ENST00000560970 HIC1Q14526 733 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 APOA5Q6Q788 366 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 VSIG10LQ86VR7 867 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 MICU3Q86XE3 530 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 MYOCDQ8IZQ8 938 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 SUGCTQ9HAC7 445 aa12.36□□□□□ -0.43
TPM1-227ENST00000560970 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 RSPH10B2B2RC85 870 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 STAM2O75886 525 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 RSPH10BP0C881 870 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 SMIM10L2AP0DMW4 78 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 SMIM10L2BP0DMW5 78 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 SP2Q02086 613 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 FAM117BQ6P1L5 589 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 Q6ZUG5 572 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
TPM1-227ENST00000560970 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
TPM1-227ENST00000560970 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
TPM1-227ENST00000560970 GPKOWQ92917 476 aaPredicted RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms