RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MTMR8Q96EF0 704 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 USP26Q9BXU7 913 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 LMAN2LQ9H0V9 348 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 RNPEPQ9H4A4 650 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 MLXIPQ9HAP2 919 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 VAT1LQ9HCJ6 419 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 RWDD3Q9Y3V2 267 aa21.57■■□□□ 1.04
TPM1-226ENST00000560959 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 MYCLP12524 364 aaPredicted RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 UBA1P22314 1058 aaKnown RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 TRAF1Q13077 416 aa21.56■■□□□ 1.04
TPM1-226ENST00000560959 PGM5Q15124 567 aa21.56■■□□□ 1.04
TPM1-226ENST00000560959 SMAD2Q15796 467 aaKnown RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 IL17RAQ96F46 866 aa21.56■■□□□ 1.04
TPM1-226ENST00000560959 MFSD14AQ96MC6 490 aa21.56■■□□□ 1.04
TPM1-226ENST00000560959 POP1Q99575 1024 aaKnown RBP21.56■■□□□ 1.04
TPM1-226ENST00000560959 WDFY4Q6ZS81 3184 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 TREHO43280 583 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 UPP2O95045 317 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 SMIM10L2AP0DMW4 78 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 SMIM10L2BP0DMW5 78 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 LTBRP36941 435 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 FAM26DQ5JW98 314 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 ENAHQ8N8S7 591 aaPredicted RBP21.55■■□□□ 1.04
TPM1-226ENST00000560959 IFIH1Q9BYX4 1025 aaKnown RBP21.55■■□□□ 1.04
TPM1-226ENST00000560959 CLDND1Q9NY35 253 aa21.55■■□□□ 1.04
TPM1-226ENST00000560959 ZBTB5O15062 677 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 CCND2P30279 289 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 BMPR1AP36894 532 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 HERC4Q5GLZ8 1057 aaPredicted RBP21.54■■□□□ 1.04
TPM1-226ENST00000560959 EP400NLQ6ZTU2 488 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 FIBCD1Q8N539 461 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 ZSWIM5Q9P217 1185 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 PCDHA1Q9Y5I3 950 aa21.54■■□□□ 1.04
TPM1-226ENST00000560959 STAM2O75886 525 aa21.53■■□□□ 1.04
TPM1-226ENST00000560959 LGALS2P05162 132 aa21.53■■□□□ 1.04
TPM1-226ENST00000560959 IRS1P35568 1242 aa21.53■■□□□ 1.04
TPM1-226ENST00000560959 RPAINQ86UA6 219 aa21.53■■□□□ 1.04
TPM1-226ENST00000560959 C11orf84Q9BUA3 381 aaPredicted RBP21.53■■□□□ 1.04
TPM1-226ENST00000560959 TRIM6-TRIM34B2RNG4 842 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 ICAM3P32942 547 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 ADAM17P78536 824 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 NEDD9Q14511 834 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 HFE2Q6ZVN8 426 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 CLP1Q92989 425 aaKnown RBP21.52■■□□□ 1.04
TPM1-226ENST00000560959 OSBPL7Q9BZF2 842 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 MYH7BA7E2Y1 1941 aa21.52■■□□□ 1.04
TPM1-226ENST00000560959 B4E1Z4 1266 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 PPP1R11O60927 126 aaPredicted RBP21.51■■□□□ 1.03
TPM1-226ENST00000560959 LINC00271P0C7V0 271 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 SDSP20132 328 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 GNPTABQ3T906 1256 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 METTL7BQ6UX53 244 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 BMP8AQ7Z5Y6 402 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 STAG2Q8N3U4 1231 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 KRT23Q9C075 422 aa21.51■■□□□ 1.03
TPM1-226ENST00000560959 GCOM1H8Y6P7 765 aaPredicted RBP21.5■■□□□ 1.03
TPM1-226ENST00000560959 NOP56O00567 594 aaKnown RBP21.5■■□□□ 1.03
TPM1-226ENST00000560959 MBTPS2O43462 519 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 SORBS3O60504 671 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 CTSHP09668 335 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 POLR2MP0CAP2 368 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 HOXA13P31271 388 aaPredicted RBP21.5■■□□□ 1.03
TPM1-226ENST00000560959 CTNNB1P35222 781 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 HYAL1Q12794 435 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 HDAC1Q13547 482 aaPredicted RBP21.5■■□□□ 1.03
TPM1-226ENST00000560959 IL31RAQ8NI17 732 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 PLVAPQ9BX97 442 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 CNNM2Q9H8M5 875 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 SETD4Q9NVD3 440 aa21.5■■□□□ 1.03
TPM1-226ENST00000560959 SPATA31C2B4DYI2 1134 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 SMAD4Q13485 552 aaKnown RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 PKN1Q16512 942 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 IMMTQ16891 758 aaKnown RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 IFIT1BQ5T764 474 aaKnown RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 GPKOWQ92917 476 aaPredicted RBP eCLIP21.49■■□□□ 1.03
TPM1-226ENST00000560959 RILPL2Q969X0 211 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 INPP4AQ96PE3 977 aaPredicted RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 GPR20Q99678 358 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 UBAC1Q9BSL1 405 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 DSCC1Q9BVC3 393 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 EHMT1Q9H9B1 1298 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 RC3H2Q9HBD1 1191 aaKnown RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 MAD2L2Q9UI95 211 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 ZNF215Q9UL58 517 aaPredicted RBP21.49■■□□□ 1.03
TPM1-226ENST00000560959 NRCAMQ92823 1304 aa21.49■■□□□ 1.03
TPM1-226ENST00000560959 PALM3A6NDB9 673 aaPredicted RBP21.48■■□□□ 1.03
TPM1-226ENST00000560959 RBAK-RBAKDNI3L0D1 243 aa21.48■■□□□ 1.03
TPM1-226ENST00000560959 GRM6O15303 877 aa21.48■■□□□ 1.03
TPM1-226ENST00000560959 EDAQ92838 391 aa21.48■■□□□ 1.03
TPM1-226ENST00000560959 ZNF689Q96CS4 500 aaPredicted RBP21.48■■□□□ 1.03
TPM1-226ENST00000560959 ADGRA3Q8IWK6 1321 aa21.48■■□□□ 1.03
TPM1-226ENST00000560959 TRIOO75962 3097 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 DLX2Q07687 328 aaPredicted RBP21.47■■□□□ 1.03
TPM1-226ENST00000560959 ADAM15Q13444 863 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 TAF2Q6P1X5 1199 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 RNF135Q8IUD6 432 aa21.47■■□□□ 1.03
TPM1-226ENST00000560959 PRRX2Q99811 253 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms