RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ZSCAN16Q9H4T2 348 aaPredicted RBP8□□□□□ -1.13
CTDSPL2-210ENST00000560834 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
CTDSPL2-210ENST00000560834 SLC5A4Q9NY91 659 aa8□□□□□ -1.13
CTDSPL2-210ENST00000560834 CYP3A7-CYP3A51PA0A087WV96 503 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 RBM47A0AV96 593 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 ADCY6O43306 1168 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 STAM2O75886 525 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 ARIH2O95376 493 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 INHAP05111 366 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 ZNF865P0CJ78 1059 aaPredicted RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 GCFC2P16383 781 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 CYP3A7P24462 503 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 ICAM3P32942 547 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 TRAPPC10P48553 1259 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 USP11P51784 963 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 NUCB2P80303 420 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 SETQ01105 290 aaPredicted RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 STXBP2Q15833 593 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 CEP55Q53EZ4 464 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 TTC38Q5R3I4 469 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 PPP4R3AQ6IN85 833 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 TAPT1Q6NXT6 567 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 EEPD1Q7L9B9 569 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 NIPA1Q7RTP0 329 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 TRMT44Q8IYL2 757 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 CYP2W1Q8TAV3 490 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 CHAMP1Q96JM3 812 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 MXRA8Q9BRK3 442 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 VTA1Q9NP79 307 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 JADE2Q9NQC1 790 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 PCDHB6Q9Y5E3 794 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 TCHHQ07283 1943 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 WDR81Q562E7 1941 aa7.99□□□□□ -1.13
CTDSPL2-210ENST00000560834 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 B4DLN1 442 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 MEIS1O00470 390 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 FIBPO43427 364 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 NEMFO60524 1076 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 CCNT1O60563 726 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 EIF3JO75822 258 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 KCNA2P16389 499 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 UBA1P22314 1058 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 PTGS1P23219 599 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 GRK4P32298 578 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 CACNB2Q08289 660 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ORC2Q13416 577 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 MTMR1Q13613 665 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ACVR2BQ13705 512 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 Q4G0T1 1027 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 RILPL1Q5EBL4 403 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 PRAMEF19Q5SWL8 479 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 TMEM63BQ5T3F8 832 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 CCDC62Q6P9F0 684 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 FBXO46Q6PJ61 603 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ETNPPLQ8TBG4 499 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 SH3TC2Q8TF17 1288 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 LENG1Q96BZ8 264 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 GPRASP2Q96D09 838 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 USP28Q96RU2 1077 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 WDR11Q9BZH6 1224 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 TMEM60Q9H2L4 133 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ABHD16BQ9H3Z7 469 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 CDHR5Q9HBB8 845 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 KCNMB3Q9NPA1 279 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 PDGFCQ9NRA1 345 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 RTEL1Q9NZ71 1219 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 CHMP5Q9NZZ3 219 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 DDX25Q9UHL0 483 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 NRBP1Q9UHY1 535 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ZHX1Q9UKY1 873 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 ARID2Q68CP9 1835 aa7.98□□□□□ -1.13
CTDSPL2-210ENST00000560834 SPATA31C2B4DYI2 1134 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 MSH4O15457 936 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 ARP10275 920 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 ATP2B1P20020 1258 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 CCND3P30281 292 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 MCM7P33993 719 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 ADCYAP1R1P41586 468 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 ATP2C1P98194 919 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 ITGB3BPQ13352 177 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 PTPAQ15257 358 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 CCDC144BQ3MJ40 725 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 GNPTABQ3T906 1256 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 PRR16Q569H4 304 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 MFSD14CQ5VZR4 134 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 SEPT14Q6ZU15 432 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 PLA2G4DQ86XP0 818 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 C4orf32Q8N8J7 132 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 SCFD2Q8WU76 684 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 HAS1Q92839 578 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 NAP1L4Q99733 375 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 AGO4Q9HCK5 861 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 KCNH7Q9NS40 1196 aa7.97□□□□□ -1.13
CTDSPL2-210ENST00000560834 CNPY2Q9Y2B0 182 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms