RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MRPL38Q96DV4 380 aaKnown RBP12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 MLXIPQ9HAP2 919 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 FAM50BQ9Y247 325 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 GPM6BQ13491 265 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 PUS10Q3MIT2 529 aaKnown RBP12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 SEPT8Q92599 483 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 SAMD11Q96NU1 681 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 ZSCAN10Q96SZ4 725 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
CDC42BPB-207ENST00000560492 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 HOXA13P31271 388 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 HSDL1Q3SXM5 330 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 HOMER1Q86YM7 354 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 EMID1Q96A84 441 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 LNPKQ9C0E8 428 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 MAF1Q9H063 256 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 JMJD4Q9H9V9 463 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 DIAPH3Q9NSV4 1193 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 MUC6Q6W4X9 2439 aa12.19□□□□□ -0.46
CDC42BPB-207ENST00000560492 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 HAS3O00219 553 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 DCXO43602 365 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 CCND2P30279 289 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 CTNNB1P35222 781 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 CLUL1Q15846 466 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 PLEKHG4Q58EX7 1191 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 CELF3Q5SZQ8 465 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 IFIT1BQ5T764 474 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 CWC27Q6UX04 472 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 SERINC5Q86VE9 423 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 FCHSD1Q86WN1 690 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 PDCD2LQ9BRP1 358 aa12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-207ENST00000560492 ATG2AQ2TAZ0 1938 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 H3BRB1 525 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 TREHO43280 583 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 SMIM10L2AP0DMW4 78 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 SMIM10L2BP0DMW5 78 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 SDSP20132 328 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 SP4Q02446 784 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 PGM5Q15124 567 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 PABPC5Q96DU9 382 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 KRT23Q9C075 422 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 TUT1Q9H6E5 874 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 PCDHA1Q9Y5I3 950 aa12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-207ENST00000560492 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 H3BNC9 293 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 LGALS2P05162 132 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 GNAT1P11488 350 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 HSD17B4P51659 736 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 HTRA4P83105 476 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 HIC1Q14526 733 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 RPAINQ86UA6 219 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 STAG2Q8N3U4 1231 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 FIBCD1Q8N539 461 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
CDC42BPB-207ENST00000560492 ZBTB5O15062 677 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 NT5C2P49902 561 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 MRE11P49959 708 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 ARHGAP4P98171 946 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 SP2Q02086 613 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 IL17RAQ96F46 866 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 C16orf70Q9BSU1 422 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 RNPEPQ9H4A4 650 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
CDC42BPB-207ENST00000560492 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms