RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 TUT1Q9H6E5 874 aaKnown RBP23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 CLDND1Q9NY35 253 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 MAP3K20Q9NYL2 800 aaKnown RBP23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 CCDC171Q6TFL3 1326 aa23.04■■□□□ 1.28
RABGGTA-214ENST00000560163 NCK2O43639 380 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 CAND2O75155 1236 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 UBA1P22314 1058 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 NT5C2P49902 561 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 CCDC178Q5BJE1 867 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 EP400NLQ6ZTU2 488 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 UPF3BQ9BZI7 483 aaKnown RBP23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 BCAS3Q9H6U6 928 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 KAT14Q9H8E8 782 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 VAT1LQ9HCJ6 419 aa23.03■■□□□ 1.28
RABGGTA-214ENST00000560163 KDM4AO75164 1064 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 SMIM10L2AP0DMW4 78 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 SMIM10L2BP0DMW5 78 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 MYCLP12524 364 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 DLX2Q07687 328 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 PGM5Q15124 567 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 HERC4Q5GLZ8 1057 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 RPAINQ86UA6 219 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 ENAHQ8N8S7 591 aaPredicted RBP23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 IL31RAQ8NI17 732 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 GPKOWQ92917 476 aaPredicted RBP eCLIP23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 MTMR8Q96EF0 704 aa23.02■■□□□ 1.28
RABGGTA-214ENST00000560163 PPP1R11O60927 126 aaPredicted RBP23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 PARP1P09874 1014 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 HYAL1Q12794 435 aa23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 FAM26DQ5JW98 314 aa23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 IQCA1Q86XH1 822 aa23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 ZSCAN10Q96SZ4 725 aaPredicted RBP23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 AMNQ9BXJ7 453 aa23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 IFIH1Q9BYX4 1025 aaKnown RBP23.01■■□□□ 1.27
RABGGTA-214ENST00000560163 MBTPS2O43462 519 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 LGALS2P05162 132 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 RB1P06400 928 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 ADAM17P78536 824 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 ANKRD45Q5TZF3 282 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 SAMD3Q8N6K7 520 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 APBB2Q92870 758 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 IL17RAQ96F46 866 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 MFSD14AQ96MC6 490 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 LMAN2LQ9H0V9 348 aa23■■□□□ 1.27
RABGGTA-214ENST00000560163 TECTAO75443 2155 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 ZNF213O14771 459 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 GRM6O15303 877 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 CTSHP09668 335 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 BMPR1AP36894 532 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 STAG2Q8N3U4 1231 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 FIBCD1Q8N539 461 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 MLXIPQ9HAP2 919 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 RC3H2Q9HBD1 1191 aaKnown RBP22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 ZSWIM5Q9P217 1185 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 MUTYHQ9UIF7 546 aa22.99■■□□□ 1.27
RABGGTA-214ENST00000560163 DHX16O60231 1041 aaKnown RBP22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 HOXA13P31271 388 aaPredicted RBP22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 RNF135Q8IUD6 432 aa22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 CLP1Q92989 425 aaKnown RBP22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 ZFP91Q96JP5 570 aaPredicted RBP22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 USP26Q9BXU7 913 aa22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 SETD4Q9NVD3 440 aa22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 LAMA4Q16363 1823 aa22.98■■□□□ 1.27
RABGGTA-214ENST00000560163 CFAP54Q96N23 3096 aa22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 B4E1Z4 1266 aa22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 CTNNB1P35222 781 aa22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 PHOX2BQ99453 314 aa22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 POP1Q99575 1024 aaKnown RBP22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 C11orf84Q9BUA3 381 aaPredicted RBP22.97■■□□□ 1.27
RABGGTA-214ENST00000560163 ZBTB5O15062 677 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 TBX10O75333 385 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 GTF2F1P35269 517 aaKnown RBP eCLIP22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 CAMK1Q14012 370 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 CLUL1Q15846 466 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 BMP8AQ7Z5Y6 402 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 EDAQ92838 391 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 EHMT1Q9H9B1 1298 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 PCDHA1Q9Y5I3 950 aa22.96■■□□□ 1.27
RABGGTA-214ENST00000560163 CHRNA1P02708 482 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 GNAT1P11488 350 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 CCND2P30279 289 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 ICAM3P32942 547 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 MFAP1P55081 439 aaKnown RBP22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 ADAM15Q13444 863 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 SMAD4Q13485 552 aaKnown RBP22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 ZNF689Q96CS4 500 aaPredicted RBP22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 SNX27Q96L92 541 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 RWDD3Q9Y3V2 267 aa22.95■■□□□ 1.26
RABGGTA-214ENST00000560163 TRIM6-TRIM34B2RNG4 842 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 KLRF2D3W0D1 207 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 SDSP20132 328 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 MRPS9P82933 396 aaKnown RBP22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 SLC35G1Q2M3R5 365 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 PRSS33Q8NF86 280 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 GPR20Q99678 358 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 MAD2L2Q9UI95 211 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 TELO2Q9Y4R8 837 aa22.94■■□□□ 1.26
RABGGTA-214ENST00000560163 ADGRA3Q8IWK6 1321 aa22.93■■□□□ 1.26
RABGGTA-214ENST00000560163 SPATA31C2B4DYI2 1134 aa22.93■■□□□ 1.26
RABGGTA-214ENST00000560163 LINC01565O15544 149 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms