RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 CAND2O75155 1236 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 IKBKEQ14164 716 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 TRIM71Q2Q1W2 868 aaKnown RBP14.1□□□□□ -0.15
SPG11-219ENST00000559822 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 MICU3Q86XE3 530 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 TET1Q8NFU7 2136 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 GPKOWQ92917 476 aaPredicted RBP eCLIP14.1□□□□□ -0.15
SPG11-219ENST00000559822 ATP6V0A1Q93050 837 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 GPRASP2Q96D09 838 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 ZBED2Q9BTP6 218 aa14.1□□□□□ -0.15
SPG11-219ENST00000559822 RBM28Q9NW13 759 aaKnown RBP14.1□□□□□ -0.15
SPG11-219ENST00000559822 NBNO60934 754 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 RXRAP19793 462 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 THPOP40225 353 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 KRT32Q14532 448 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 CCDC85BQ15834 202 aaPredicted RBP14.09□□□□□ -0.15
SPG11-219ENST00000559822 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 IL27Q8NEV9 243 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 NEK1Q96PY6 1258 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 GPR20Q99678 358 aa14.09□□□□□ -0.15
SPG11-219ENST00000559822 RSPH10B2B2RC85 870 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 CDC45O75419 566 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 LGR5O75473 907 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 RSPH10BP0C881 870 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 POU3F3P20264 500 aaPredicted RBP14.08□□□□□ -0.16
SPG11-219ENST00000559822 HOXC8P31273 242 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 ZNF200P98182 395 aaPredicted RBP14.08□□□□□ -0.16
SPG11-219ENST00000559822 TAP1Q03518 808 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 GPNMBQ14956 572 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 HEATR3Q7Z4Q2 680 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 CMTR1Q8N1G2 835 aaKnown RBP14.08□□□□□ -0.16
SPG11-219ENST00000559822 LRRC2Q9BYS8 371 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.16
SPG11-219ENST00000559822 hCG_1984214I3L0E3 225 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 MAFGO15525 162 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 GJB5O95377 273 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 HMGB1P09429 215 aaKnown RBP14.07□□□□□ -0.16
SPG11-219ENST00000559822 MRPS5P82675 430 aaKnown RBP14.07□□□□□ -0.16
SPG11-219ENST00000559822 TSGA10IPQ3SY00 556 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 PPP1R18Q6NYC8 613 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 TRAF7Q6Q0C0 670 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 APOA5Q6Q788 366 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 DHX32Q7L7V1 743 aaKnown RBP14.07□□□□□ -0.16
SPG11-219ENST00000559822 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 MICALL1Q8N3F8 863 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 CCDC82Q8N4S0 544 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
SPG11-219ENST00000559822 ARNTL2Q8WYA1 636 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 WNT8BQ93098 351 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 RAD9AQ99638 391 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 RNPEPQ9H4A4 650 aa14.07□□□□□ -0.16
SPG11-219ENST00000559822 TREHO43280 583 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 ZBTB43O43298 467 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 AMHP03971 560 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 RCAN1P53805 252 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 DEFB103AP81534 67 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 SP4Q02446 784 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 MTMR1Q13613 665 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 HIC1Q14526 733 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 RTN1Q16799 776 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 AAK1Q2M2I8 961 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
SPG11-219ENST00000559822 ASB2Q96Q27 587 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 GLT8D2Q9H1C3 349 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 BCAS3Q9H6U6 928 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 CERS4Q9HA82 394 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 PRDM6Q9NQX0 595 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 PCDHA6Q9UN73 950 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 PCDHA8Q9Y5H6 950 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 NRCAMQ92823 1304 aa14.06□□□□□ -0.16
SPG11-219ENST00000559822 hCG_1642624A0A1W2PR95 340 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 FOSP01100 380 aaPredicted RBP14.05□□□□□ -0.16
SPG11-219ENST00000559822 KCNA2P16389 499 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
SPG11-219ENST00000559822 NAPAP54920 295 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 FGD1P98174 961 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 MBTPS1Q14703 1052 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
SPG11-219ENST00000559822 UBE2SQ16763 222 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 PLEKHG4Q58EX7 1191 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 TAF2Q6P1X5 1199 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 RSPH3Q86UC2 560 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 TRIM50Q86XT4 487 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 DBF4BQ8NFT6 615 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 SEPT8Q92599 483 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 SETD4Q9NVD3 440 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 ERAP1Q9NZ08 941 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 INSL6Q9Y581 213 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 UBIAD1Q9Y5Z9 338 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 MTCH2Q9Y6C9 303 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 DOCK5Q9H7D0 1870 aa14.05□□□□□ -0.16
SPG11-219ENST00000559822 PTPRSQ13332 1948 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms