RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 GOLGA6AQ9NYA3 693 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 RSPH14Q9UHP6 348 aa18.31■□□□□ 0.52
SPG11-215ENST00000559193 E9PMD0 336 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 PPFIA4O75335 1185 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 SERPING1P05155 500 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 TNFRSF8P28908 595 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 EPHB4P54760 987 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 NELFCDQ8IXH7 590 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 TSEN2Q8NCE0 465 aaKnown RBP18.3■□□□□ 0.52
SPG11-215ENST00000559193 SH3GL2Q99962 352 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 NUCKS1Q9H1E3 243 aaKnown RBP18.3■□□□□ 0.52
SPG11-215ENST00000559193 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 SLC16A2P36021 539 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
SPG11-215ENST00000559193 C8orf74Q6P047 294 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 PCDHA12Q9UN75 941 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 LY75O60449 1722 aa18.3■□□□□ 0.52
SPG11-215ENST00000559193 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 NPHP3-ACAD11A0A0J9YXS1 232 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
SPG11-215ENST00000559193 MARSP56192 900 aaKnown RBP18.29■□□□□ 0.52
SPG11-215ENST00000559193 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
SPG11-215ENST00000559193 EMBQ6PCB8 327 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 UIMC1Q96RL1 719 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 TSKSQ9UJT2 592 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 MYH7BA7E2Y1 1941 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 USP17L10C9JJH3 530 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 MARCH6O60337 910 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
SPG11-215ENST00000559193 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 NT5C3AQ9H0P0 336 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 KCTD10Q9H3F6 313 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 KIAA1024Q9UPX6 916 aa18.29■□□□□ 0.52
SPG11-215ENST00000559193 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
SPG11-215ENST00000559193 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 POTEB3A0JP26 581 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 POTECB2RU33 542 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 PALMO75781 387 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 MRPL12P52815 198 aaKnown RBP18.28■□□□□ 0.52
SPG11-215ENST00000559193 POTEBQ6S5H4 581 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 SCFD1Q8WVM8 642 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
SPG11-215ENST00000559193 C8orf37Q96NL8 207 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
SPG11-215ENST00000559193 ZBTB5O15062 677 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 PLA2G4BP0C869 781 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 GTF2IP78347 998 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 NAB2Q15742 525 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 CCDC65Q8IXS2 484 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 PSTPIP2Q9H939 334 aa18.28■□□□□ 0.52
SPG11-215ENST00000559193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
SPG11-215ENST00000559193 GNA14O95837 355 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 FTCDO95954 541 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 KLRC1P26715 233 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 SHMT1P34896 483 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 GPBP1Q86WP2 473 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 ZC3H3Q8IXZ2 948 aaKnown RBP18.27■□□□□ 0.52
SPG11-215ENST00000559193 TBC1D5Q92609 795 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
SPG11-215ENST00000559193 GOLGA8KD6RF30 607 aa18.27■□□□□ 0.51
SPG11-215ENST00000559193 CYP11B2P19099 503 aa18.27■□□□□ 0.51
SPG11-215ENST00000559193 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.51
SPG11-215ENST00000559193 SLC18A3Q16572 532 aa18.27■□□□□ 0.51
SPG11-215ENST00000559193 GLE1Q53GS7 698 aaKnown RBP18.27■□□□□ 0.51
SPG11-215ENST00000559193 GANQ9H2C0 597 aa18.27■□□□□ 0.51
SPG11-215ENST00000559193 A0A087X0T9 212 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 F8W031 263 aaPredicted RBP18.26■□□□□ 0.51
SPG11-215ENST00000559193 C6orf229H3BNL8 230 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 FAM228BP0C875 321 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 HERC4Q5GLZ8 1057 aaPredicted RBP18.26■□□□□ 0.51
SPG11-215ENST00000559193 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 PACSIN1Q9BY11 444 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 GLI1P08151 1106 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 DNA2P51530 1060 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 PPFIA1Q13136 1202 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
SPG11-215ENST00000559193 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 GDF3Q9NR23 364 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
SPG11-215ENST00000559193 LTBP1Q14766 1721 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 BBOX1O75936 387 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms