RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GPR20Q99678 358 aa20.17■□□□□ 0.82
SMAD3-210ENST00000559092 BCAS3Q9H6U6 928 aa20.17■□□□□ 0.82
SMAD3-210ENST00000559092 UBIAD1Q9Y5Z9 338 aa20.17■□□□□ 0.82
SMAD3-210ENST00000559092 CYP46A1Q9Y6A2 500 aa20.17■□□□□ 0.82
SMAD3-210ENST00000559092 H3BRB1 525 aa20.16■□□□□ 0.82
SMAD3-210ENST00000559092 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
SMAD3-210ENST00000559092 SORBS3O60504 671 aa20.16■□□□□ 0.82
SMAD3-210ENST00000559092 PARNO95453 639 aaKnown RBP20.16■□□□□ 0.82
SMAD3-210ENST00000559092 RBL2Q08999 1139 aa20.16■□□□□ 0.82
SMAD3-210ENST00000559092 OTOP2Q7RTS6 562 aa20.16■□□□□ 0.82
SMAD3-210ENST00000559092 TUT1Q9H6E5 874 aaKnown RBP20.16■□□□□ 0.82
SMAD3-210ENST00000559092 JADE2Q9NQC1 790 aa20.16■□□□□ 0.82
SMAD3-210ENST00000559092 LGALS2P05162 132 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 SCG2P13521 617 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 PTK7Q13308 1070 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 MTMR1Q13613 665 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 MCTP2Q6DN12 878 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 CCDC12Q8WUD4 166 aaPredicted RBP20.15■□□□□ 0.82
SMAD3-210ENST00000559092 KIAA1217Q5T5P2 1943 aa20.15■□□□□ 0.82
SMAD3-210ENST00000559092 SELPP16109 830 aa20.14■□□□□ 0.81
SMAD3-210ENST00000559092 KCNA2P16389 499 aa20.14■□□□□ 0.81
SMAD3-210ENST00000559092 DNAJB2P25686 324 aa20.14■□□□□ 0.81
SMAD3-210ENST00000559092 PDIA3P30101 505 aaKnown RBP20.14■□□□□ 0.81
SMAD3-210ENST00000559092 CLK2P49760 499 aaKnown RBP20.14■□□□□ 0.81
SMAD3-210ENST00000559092 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
SMAD3-210ENST00000559092 GUCD1Q96NT3 240 aa20.14■□□□□ 0.81
SMAD3-210ENST00000559092 CXXC1Q9P0U4 656 aaPredicted RBP20.14■□□□□ 0.81
SMAD3-210ENST00000559092 ESYT2A0FGR8 921 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 EIF5BO60841 1220 aaKnown RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 ATP9AO75110 1047 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 ACTN1P12814 892 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 IFNAR1P17181 557 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 HOXC8P31273 242 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 NTRK3Q16288 839 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 DEFB128Q7Z7B8 93 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 DHX38Q92620 1227 aaKnown RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 TIFAQ96CG3 184 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 ZNF274Q96GC6 653 aaPredicted RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 MXRA8Q9BRK3 442 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 RNF26Q9BY78 433 aaPredicted RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 ZMYND12Q9H0C1 365 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 TTYH1Q9H313 450 aaPredicted RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
SMAD3-210ENST00000559092 SLC4A7Q9Y6M7 1214 aa20.13■□□□□ 0.81
SMAD3-210ENST00000559092 GNAT1P11488 350 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 SREBF1P36956 1147 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 RAB30Q15771 203 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 PKN1Q16512 942 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 C6orf50Q9HD87 102 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 COL6A3P12111 3177 aa20.12■□□□□ 0.81
SMAD3-210ENST00000559092 C17orf102A2RUQ5 167 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 CKBP12277 381 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 GNA11P29992 359 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 TOB2Q14106 344 aaPredicted RBP20.11■□□□□ 0.81
SMAD3-210ENST00000559092 TRIM71Q2Q1W2 868 aaKnown RBP20.11■□□□□ 0.81
SMAD3-210ENST00000559092 CEP55Q53EZ4 464 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 LRRC8DQ7L1W4 858 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 SERINC5Q86VE9 423 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 SEPT1Q8WYJ6 367 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 CDX2Q99626 313 aaPredicted RBP20.11■□□□□ 0.81
SMAD3-210ENST00000559092 ANO3Q9BYT9 981 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 PBX4Q9BYU1 374 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMAD3-210ENST00000559092 KCNH7Q9NS40 1196 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 MSRAQ9UJ68 235 aa20.11■□□□□ 0.81
SMAD3-210ENST00000559092 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 MEIS1O00470 390 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 CXCL10P02778 98 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 ZNF200P98182 395 aaPredicted RBP20.1■□□□□ 0.81
SMAD3-210ENST00000559092 NIPA1Q7RTP0 329 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 PHOSPHO2Q8TCD6 241 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 BICD2Q8TD16 824 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 ATP6V0A1Q93050 837 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 PHKBQ93100 1093 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 RNPEPQ9H4A4 650 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 ZNF576Q9H609 170 aa20.1■□□□□ 0.81
SMAD3-210ENST00000559092 NFASCO94856 1347 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 ZBBXA8MT70 800 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 BAIAP3O94812 1187 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 TCF7P36402 384 aaPredicted RBP20.09■□□□□ 0.81
SMAD3-210ENST00000559092 ANAPC15P60006 121 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 CCT2P78371 535 aaKnown RBP20.09■□□□□ 0.81
SMAD3-210ENST00000559092 HIC1Q14526 733 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 UTP14CQ5TAP6 766 aaKnown RBP20.09■□□□□ 0.81
SMAD3-210ENST00000559092 CCDC148Q8NFR7 591 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 CYP2W1Q8TAV3 490 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 JPH1Q9HDC5 661 aaPredicted RBP20.09■□□□□ 0.81
SMAD3-210ENST00000559092 PDRG1Q9NUG6 133 aa20.09■□□□□ 0.81
SMAD3-210ENST00000559092 GSTTP1A0A1W2PQM5 241 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 CAND2O75155 1236 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 CYP3A4P08684 503 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 ATP2A2P16615 1042 aaKnown RBP20.08■□□□□ 0.81
SMAD3-210ENST00000559092 ZNF76P36508 570 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 PBX2P40425 430 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 ARHGAP4P98171 946 aa20.08■□□□□ 0.81
SMAD3-210ENST00000559092 SP4Q02446 784 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms