RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SPC25Q9HBM1 224 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 DDX41Q9UJV9 622 aaKnown RBP7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 CLIC4Q9Y696 253 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 DOCK3Q8IZD9 2030 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 NFASCO94856 1347 aa7.45□□□□□ -1.22
CHRNA3-204ENST00000559002 ZNFX1Q9P2E3 1918 aaKnown RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 LRRC37A2A6NM11 1700 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 VWA3AA6NCI4 1184 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 NOP56O00567 594 aaKnown RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SPTLC2O15270 562 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 CHMP2AO43633 222 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MSCO60682 206 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 ATP9AO75110 1047 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SMPD1P17405 629 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MARCKSP29966 332 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 PRPHP41219 470 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 KRT76Q01546 638 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SP2Q02086 613 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 ITGB3BPQ13352 177 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SLC39A14Q15043 492 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 BRDTQ58F21 947 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 ARL6IP4Q66PJ3 421 aaKnown RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 NCAPH2Q6IBW4 605 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 CCDC62Q6P9F0 684 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 METTL7BQ6UX53 244 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 DTHD1Q6ZMT9 781 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MIER3Q7Z3K6 550 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 TLK2Q86UE8 772 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 LINC00301Q8NCQ3 95 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 OR6J1Q8NGC5 347 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 HAS1Q92839 578 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 COPS5Q92905 334 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 GJA10Q969M2 543 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 FERMT2Q96AC1 680 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 LENG1Q96BZ8 264 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SPATA33Q96N06 139 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 GBP4Q96PP9 640 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MTMR9Q96QG7 549 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MCOLN1Q9GZU1 580 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 TTC12Q9H892 705 aaPredicted RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SLC9A2Q9UBY0 812 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 DDX20Q9UHI6 824 aaKnown RBP7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 PCDHA12Q9UN75 941 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 SAMM50Q9Y512 469 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 MYH7BA7E2Y1 1941 aa7.44□□□□□ -1.22
CHRNA3-204ENST00000559002 WDR64B1ANS9 1081 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 DYNC1LI2O43237 492 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 PPP6R2O75170 966 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 DUSP11O75319 330 aaKnown RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 PSMD10O75832 226 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 FARP2O94887 1054 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 MYCNP04198 464 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 CCL5P13501 91 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 SFNP31947 248 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 TECP42680 631 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ME1P48163 572 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 CPT1AP50416 773 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 FXR2P51116 673 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 JAK3P52333 1124 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ARHGAP1Q07960 439 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 PTPAQ15257 358 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 TMEM63BQ5T3F8 832 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 GJC2Q5T442 439 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 C4orf32Q8N8J7 132 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ERMNQ8TAM6 284 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 LEO1Q8WVC0 666 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 EMID1Q96A84 441 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ARMC5Q96C12 935 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 UNC93B1Q9H1C4 597 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 UNC45AQ9H3U1 944 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 XPNPEP3Q9NQH7 507 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 LRWD1Q9UFC0 647 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 RCOR1Q9UKL0 485 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 SRPRBQ9Y5M8 271 aaKnown RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 MORC2Q9Y6X9 1032 aaPredicted RBP7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 ELP1O95163 1332 aa7.43□□□□□ -1.22
CHRNA3-204ENST00000559002 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 POTEMA6NI47 508 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 GOLGA6L22H0YM25 854 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 BACH1O14867 736 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 DHX15O43143 795 aaKnown RBP7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 ADCY6O43306 1168 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 ZEB2O60315 1214 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 CUTAO60888 179 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 PSAPP07602 524 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 MMP3P08254 477 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 PTGS1P23219 599 aa7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 LONP1P36776 959 aaKnown RBP7.42□□□□□ -1.22
CHRNA3-204ENST00000559002 TXLNAP40222 546 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms