RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CALML3P27482 149 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 SCNN1AP37088 669 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 ALDH5A1P51649 535 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 WNT7BP56706 349 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 RNF207Q6ZRF8 634 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 CATIPQ7Z7H3 387 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 FBXO11Q86XK2 927 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 FBXO16Q8IX29 292 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 C7orf61Q8IZ16 206 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 MORC4Q8TE76 937 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 TBC1D5Q92609 795 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 CLP1Q92989 425 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 SENP6Q9GZR1 1112 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 RIOX1Q9H6W3 641 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 COL20A1Q9P218 1284 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 PCDH10Q9P2E7 1040 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 CDV3Q9UKY7 258 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 ZBTB5O15062 677 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 DUSP11O75319 330 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 DDAH1O94760 285 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PTGS1P23219 599 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 EDNRBP24530 442 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADCYAP1R1P41586 468 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 LIFRP42702 1097 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 USP4Q13107 963 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 TMEM63BQ5T3F8 832 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 CCSAPQ6IQ19 270 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 TAPT1Q6NXT6 567 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 EEPD1Q7L9B9 569 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SIX5Q8N196 739 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 EHBP1Q8NDI1 1231 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 RGS22Q8NE09 1264 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 KLHDC9Q8NEP7 349 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 NUP133Q8WUM0 1156 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 KCNB2Q92953 911 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 TCEANC2Q96MN5 208 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 NEK1Q96PY6 1258 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PIGSQ96S52 555 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 MAP3K14Q99558 947 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 AMNQ9BXJ7 453 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 UPF3AQ9H1J1 476 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PDGFCQ9NRA1 345 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PHF24Q9UPV7 400 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 NR2E3Q9Y5X4 410 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 LAMA2P24043 3122 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 LOC102724159A0A0B4J2E5 919 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 CTAGE5O15320 804 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PLEKHA8P1O95397 391 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 RXRAP19793 462 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 CST5P28325 142 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 HSPA4P34932 840 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SCTRP47872 440 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 GJA9P57773 515 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 GHRHRQ02643 423 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SNX17Q15036 470 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PWP2Q15269 919 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 NFXL1Q6ZNB6 911 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 RNF180Q86T96 592 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 RAB11FIP4Q86YS3 637 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 DNERQ8NFT8 737 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SYTL5Q8TDW5 730 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 FERMT2Q96AC1 680 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SPZ1Q9BXG8 430 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 MAF1Q9H063 256 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 PRO3102Q9H379 93 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 VTA1Q9NP79 307 aa6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADD3Q9UEY8 706 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 ZMYND8Q9ULU4 1186 aaPredicted RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 MRPL11Q9Y3B7 192 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-204ENST00000558966 SZT2Q5T011 3432 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 PNMA6FA0A0J9YX94 578 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 A0A1W2PQ45 241 aaPredicted RBP6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 A0A1W2PQY0 241 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 CCDC69A6NI79 296 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 PRMT3O60678 531 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 CPA1P15085 419 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SMPD1P17405 629 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SYN1P17600 705 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 HSD17B4P51659 736 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 ACLYP53396 1101 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SEC13P55735 322 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 RTP1P59025 263 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 NKX3-2P78367 333 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 TNFAIP2Q03169 654 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 KRT32Q14532 448 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 APOA5Q6Q788 366 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SLC39A5Q6ZMH5 540 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SGMS1Q86VZ5 419 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 TMTC2Q8N394 836 aa6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 SRBD1Q8N5C6 995 aaKnown RBP6.97□□□□□ -1.29
CTDSPL2-204ENST00000558966 CTCFLQ8NI51 663 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms