RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 VAV2P52735 878 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 VPS72Q15906 364 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 TNFRSF25Q93038 417 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 COL4A1P02462 1669 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 GOLGA6L7A0A1B0GV03 622 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 SEPT2Q15019 361 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 CEP85LQ5SZL2 805 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
SEC11A-206ENST00000558924 TAF4BQ92750 862 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 DDX12PQ92771 950 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 PYM1Q9BRP8 204 aaKnown RBP13.36□□□□□ -0.27
SEC11A-206ENST00000558924 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
SEC11A-206ENST00000558924 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 CNTNAP4Q9C0A0 1308 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 FAM237AA0A1B0GTK4 181 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 POTECB2RU33 542 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 PDHBP11177 359 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 CDC25CP30307 473 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 CHRNA5P30532 468 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 CDR1P51861 262 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 ZKSCAN4Q969J2 545 aaPredicted RBP13.36□□□□□ -0.27
SEC11A-206ENST00000558924 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 TSG101Q99816 390 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 MYH7P12883 1935 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 NUP188Q5SRE5 1749 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 MYMKA6NI61 221 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 AGPSO00116 658 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 RCAN1P53805 252 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 HERVK_113P62684 666 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
SEC11A-206ENST00000558924 MTA3Q9BTC8 594 aa13.36□□□□□ -0.27
SEC11A-206ENST00000558924 MRPL12P52815 198 aaKnown RBP13.35□□□□□ -0.27
SEC11A-206ENST00000558924 NT5DC1Q5TFE4 455 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 GPBP1Q86WP2 473 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 AP1M1Q9BXS5 423 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.35□□□□□ -0.27
SEC11A-206ENST00000558924 REXO2Q9Y3B8 237 aaKnown RBP13.35□□□□□ -0.27
SEC11A-206ENST00000558924 GLI3P10071 1580 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 BICDL2A1A5D9 508 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
SEC11A-206ENST00000558924 SORBS3O60504 671 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 DDR1Q08345 913 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 IFFO1Q0D2I5 559 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 CERKLQ49MI3 558 aaPredicted RBP13.35□□□□□ -0.27
SEC11A-206ENST00000558924 CDKAL1Q5VV42 579 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 KCNK18Q7Z418 384 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 LRRC15Q8TF66 581 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
SEC11A-206ENST00000558924 EIF4E1BA6NMX2 242 aaKnown RBP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CEP104O60308 925 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 BUB1BO60566 1050 aaPredicted RBP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 TTLL1O95922 423 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 SH3RF1Q7Z6J0 888 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 MIEF2Q96C03 454 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 POTEFA5A3E0 1075 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CLIC2O15247 247 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 MCM3P25205 808 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 ELF1P32519 619 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 DNM2P50570 870 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 SP4Q02446 784 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 NNTQ13423 1086 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CUL5Q93034 780 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 LRP6O75581 1613 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CCNE1P24864 410 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 TRADDQ15628 312 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 MYH3P11055 1940 aa13.34□□□□□ -0.27
SEC11A-206ENST00000558924 KCNK3O14649 394 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 RAD17O75943 681 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 PEX19P40855 299 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 CCDC114Q96M63 670 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 SPAG5Q96R06 1193 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms