RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 FAM173BQ6P4H8 233 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 CCDC62Q6P9F0 684 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 DEFB118Q96PH6 123 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 TEKT3Q9BXF9 490 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
NEO1-205ENST00000558886 Q9Y3F1 56 aa11.81□□□□□ -0.52
NEO1-205ENST00000558886 LAD1O00515 517 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 EDIL3O43854 480 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 ZEB2O60315 1214 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 ATP9AO75110 1047 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 ARIH2O95376 493 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 C6orf222P0C671 652 aaPredicted RBP11.8□□□□□ -0.52
NEO1-205ENST00000558886 UBA1P22314 1058 aaKnown RBP11.8□□□□□ -0.52
NEO1-205ENST00000558886 TXKP42681 527 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 SP2Q02086 613 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 PTGDRQ13258 359 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 CELF3Q5SZQ8 465 aaKnown RBP11.8□□□□□ -0.52
NEO1-205ENST00000558886 RNF180Q86T96 592 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 TLK2Q86UE8 772 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 COPS5Q92905 334 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 RIT2Q99578 217 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 JPH1Q9HDC5 661 aaPredicted RBP11.8□□□□□ -0.52
NEO1-205ENST00000558886 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
NEO1-205ENST00000558886 SLC9A2Q9UBY0 812 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 PCDHA12Q9UN75 941 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 ZDHHC9Q9Y397 364 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 SAMM50Q9Y512 469 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 NFASCO94856 1347 aa11.8□□□□□ -0.52
NEO1-205ENST00000558886 PGK1P00558 417 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 KCNA2P16389 499 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 DDIT3P35638 169 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 CPT1AP50416 773 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 KRT85P78386 507 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 KRT76Q01546 638 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 TMEM63BQ5T3F8 832 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 GJC2Q5T442 439 aaPredicted RBP11.79□□□□□ -0.52
NEO1-205ENST00000558886 METTL7BQ6UX53 244 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 DTHD1Q6ZMT9 781 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 LENG9Q96B70 501 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 LENG1Q96BZ8 264 aaPredicted RBP11.79□□□□□ -0.52
NEO1-205ENST00000558886 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
NEO1-205ENST00000558886 CLIC4Q9Y696 253 aa11.79□□□□□ -0.52
NEO1-205ENST00000558886 WNT7AO00755 349 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 CHMP2AO43633 222 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 GJB1P08034 283 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 GJA9P57773 515 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 ARHGAP1Q07960 439 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 FSCN1Q16658 493 aaKnown RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 MIS18BP1Q6P0N0 1132 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 MIER3Q7Z3K6 550 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 AFG1LQ8WV93 481 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 GJA10Q969M2 543 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 EMID1Q96A84 441 aaPredicted RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 VTI1AQ96AJ9 217 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 TMEM60Q9H2L4 133 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 TTC12Q9H892 705 aaPredicted RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
NEO1-205ENST00000558886 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
NEO1-205ENST00000558886 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 KBTBD13C9JR72 458 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 BACH1O14867 736 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 KPNA6O60684 536 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 PPFIA4O75335 1185 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 PSMD10O75832 226 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 FARP2O94887 1054 aaPredicted RBP11.77□□□□□ -0.53
NEO1-205ENST00000558886 SGPL1O95470 568 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 PSAPP07602 524 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 MYL3P08590 195 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 CAPN2P17655 700 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 SFNP31947 248 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 PRPHP41219 470 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 TECP42680 631 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 JAK3P52333 1124 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 ACTR2P61160 394 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.53
NEO1-205ENST00000558886 BEX3Q00994 111 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 DGKDQ16760 1214 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 UTP14CQ5TAP6 766 aaKnown RBP11.77□□□□□ -0.53
NEO1-205ENST00000558886 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.53
NEO1-205ENST00000558886 LHX8Q68G74 356 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
NEO1-205ENST00000558886 ZNF746Q6NUN9 644 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms