RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 LIFRP42702 1097 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 IKBKEQ14164 716 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 NEDD9Q14511 834 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 PLEKHG4Q58EX7 1191 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 KRT40Q6A162 431 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 RNPEPQ9H4A4 650 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
SEMA4B-205ENST00000558848 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SH2B2O14492 632 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SORBS3O60504 671 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 CAND2O75155 1236 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 KIF5BP33176 963 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 ERVK-21P61565 698 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 TFF2Q03403 129 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 CYFIP1Q7L576 1253 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 TMTC2Q8N394 836 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SRBD1Q8N5C6 995 aaKnown RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 TMEM87BQ96K49 555 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 UHRF1Q96T88 793 aaPredicted RBP13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 MYL10Q9BUA6 226 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 COG5Q9UP83 839 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 TELO2Q9Y4R8 837 aa13.62□□□□□ -0.23
SEMA4B-205ENST00000558848 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 TREHO43280 583 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 PRC1O43663 620 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 ATP6V0A1Q93050 837 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
SEMA4B-205ENST00000558848 SLC27A2O14975 620 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 MCM5P33992 734 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 THPOP40225 353 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 GNAQP50148 359 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 SGMS1Q86VZ5 419 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 GPRASP2Q96D09 838 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 ESYT1Q9BSJ8 1104 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
SEMA4B-205ENST00000558848 COL4A6Q14031 1691 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 NOP56O00567 594 aaKnown RBP13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 ATP9AO75110 1047 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 CALM1P0DP23 149 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 CALM2P0DP24 149 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 CALM3P0DP25 149 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 KCNA2P16389 499 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 ITGB5P18084 799 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 KCNQ1P51787 676 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 GIMAP8Q8ND71 665 aaPredicted RBP13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 TOP1MTQ969P6 601 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 SETD4Q9NVD3 440 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 UBIAD1Q9Y5Z9 338 aa13.59□□□□□ -0.23
SEMA4B-205ENST00000558848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 GNAT1P11488 350 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 NLRX1Q86UT6 975 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 TEX2Q8IWB9 1127 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 CUL5Q93034 780 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 HLA-CQ95604 372 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 SEC63Q9UGP8 760 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 NRCAMQ92823 1304 aa13.58□□□□□ -0.24
SEMA4B-205ENST00000558848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms