RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 KCNJ6P48051 423 aa17.2■□□□□ 0.34
IDH3A-205ENST00000558509 SERINC5Q86VE9 423 aa17.2■□□□□ 0.34
IDH3A-205ENST00000558509 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
IDH3A-205ENST00000558509 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
IDH3A-205ENST00000558509 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
IDH3A-205ENST00000558509 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
IDH3A-205ENST00000558509 hCG_1642624A0A1W2PR95 340 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 SH2B2O14492 632 aaPredicted RBP17.19■□□□□ 0.34
IDH3A-205ENST00000558509 MEIS2O14770 477 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 TREHO43280 583 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 PPFIA4O75335 1185 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 SMIM10L2AP0DMW4 78 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 SMIM10L2BP0DMW5 78 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 BMP1P13497 986 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
IDH3A-205ENST00000558509 UHRF1Q96T88 793 aaPredicted RBP17.19■□□□□ 0.34
IDH3A-205ENST00000558509 MTUS1Q9ULD2 1270 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 LOXHD1Q8IVV2 1947 aa17.19■□□□□ 0.34
IDH3A-205ENST00000558509 COL4A6Q14031 1691 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 ERICH2A1L162 156 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 LINC01553A4QN01 128 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 SPATA31C2B4DYI2 1134 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 PRC1O43663 620 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 GJB5O95377 273 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 ICAM3P32942 547 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 CATIPQ7Z7H3 387 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 SAMD3Q8N6K7 520 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 GPR20Q99678 358 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 MLXIPQ9HAP2 919 aa17.18■□□□□ 0.34
IDH3A-205ENST00000558509 SLC27A2O14975 620 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 LGR5O75473 907 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 CTSHP09668 335 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 THPOP40225 353 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 SP4Q02446 784 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 SKIV2LQ15477 1246 aaKnown RBP17.17■□□□□ 0.34
IDH3A-205ENST00000558509 RNPEPQ9H4A4 650 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 KIAA1671Q9BY89 1806 aa17.17■□□□□ 0.34
IDH3A-205ENST00000558509 ABHD14A-ACY1A0A1B0GW23 586 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 H3BRB1 525 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 DDAH1O94760 285 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 TGFB3P10600 412 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 UBE2SQ16763 222 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 ATP6V0A1Q93050 837 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 TUT1Q9H6E5 874 aaKnown RBP17.16■□□□□ 0.34
IDH3A-205ENST00000558509 SUGCTQ9HAC7 445 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 SETD4Q9NVD3 440 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
IDH3A-205ENST00000558509 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 KIF28PB7ZC32 967 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 FIBPO43427 364 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 ATP9AO75110 1047 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 ADAM17P78536 824 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
IDH3A-205ENST00000558509 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
IDH3A-205ENST00000558509 C17orf80Q9BSJ5 609 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
IDH3A-205ENST00000558509 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
IDH3A-205ENST00000558509 ERVK-21P61565 698 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 PCNX4Q63HM2 1172 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 RUFY4Q6ZNE9 571 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
IDH3A-205ENST00000558509 SMARCC2Q8TAQ2 1214 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 LMBR1Q8WVP7 490 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
IDH3A-205ENST00000558509 MAP3K14Q99558 947 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 RAD9AQ99638 391 aa17.14■□□□□ 0.33
IDH3A-205ENST00000558509 MYO7AQ13402 2215 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.13■□□□□ 0.33
IDH3A-205ENST00000558509 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
IDH3A-205ENST00000558509 KCNA2P16389 499 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 ITGB5P18084 799 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 IKBKEQ14164 716 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 GNPTABQ3T906 1256 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
IDH3A-205ENST00000558509 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
IDH3A-205ENST00000558509 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
IDH3A-205ENST00000558509 TRAF1Q13077 416 aa17.12■□□□□ 0.33
IDH3A-205ENST00000558509 NEDD9Q14511 834 aa17.12■□□□□ 0.33
IDH3A-205ENST00000558509 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
IDH3A-205ENST00000558509 TMTC3Q6ZXV5 915 aa17.12■□□□□ 0.33
IDH3A-205ENST00000558509 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
IDH3A-205ENST00000558509 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
IDH3A-205ENST00000558509 KHSRPQ92945 711 aaKnown RBP eCLIP17.12■□□□□ 0.333e-8■■■■□ 25.9
IDH3A-205ENST00000558509 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms