RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 KRT79Q5XKE5 535 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 ARMCX2Q7L311 632 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 RDM1Q8NG50 284 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 TINF2Q9BSI4 451 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 GOLPH3LQ9H4A5 285 aa16.75■□□□□ 0.27
VPS18-202ENST00000558474 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
VPS18-202ENST00000558474 GPR25O00155 361 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 KINO60870 393 aaKnown RBP16.74■□□□□ 0.27
VPS18-202ENST00000558474 ZNF202O95125 648 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 KCNA2P16389 499 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 LIG1P18858 919 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 HOXD10P28358 340 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 SFNP31947 248 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 SEMA3FQ13275 785 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 NEDD9Q14511 834 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 HYIQ5T013 277 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
VPS18-202ENST00000558474 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 CABP7Q86V35 215 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 ERO1AQ96HE7 468 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 EPSTI1Q96J88 318 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 NT5C3AQ9H0P0 336 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 ABHD16BQ9H3Z7 469 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 CUEDC2Q9H467 287 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 NRBP1Q9UHY1 535 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
VPS18-202ENST00000558474 CTAGE5O15320 804 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 NR1I2O75469 434 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
VPS18-202ENST00000558474 IGHA2P01877 340 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 JAK3P52333 1124 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 ITGB3BPQ13352 177 aaPredicted RBP16.73■□□□□ 0.27
VPS18-202ENST00000558474 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
VPS18-202ENST00000558474 IQUBQ8NA54 791 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 SCFD2Q8WU76 684 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 POLR3CQ9BUI4 534 aaPredicted RBP16.73■□□□□ 0.27
VPS18-202ENST00000558474 MAGEF1Q9HAY2 307 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 DISC1Q9NRI5 854 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.73■□□□□ 0.27
VPS18-202ENST00000558474 MCM3APO60318 1980 aa16.73■□□□□ 0.27
VPS18-202ENST00000558474 POTEMA6NI47 508 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 FKTNO75072 461 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 RPA1P27694 616 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 CTGFP29279 349 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 PRMT2P55345 433 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 EPHA7Q15375 998 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
VPS18-202ENST00000558474 MMTAG2Q9BU76 263 aaKnown RBP16.72■□□□□ 0.27
VPS18-202ENST00000558474 TUFT1Q9NNX1 390 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 HOOK1Q9UJC3 728 aaKnown RBP16.72■□□□□ 0.27
VPS18-202ENST00000558474 LOXHD1Q8IVV2 1947 aa16.72■□□□□ 0.27
VPS18-202ENST00000558474 WDR64B1ANS9 1081 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 NKRFO15226 690 aaKnown RBP eCLIP16.71■□□□□ 0.27
VPS18-202ENST00000558474 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
VPS18-202ENST00000558474 ATP9AO75110 1047 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 SNAI1O95863 264 aaPredicted RBP16.71■□□□□ 0.27
VPS18-202ENST00000558474 RRAGBQ5VZM2 374 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 NCAPH2Q6IBW4 605 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 UNC45AQ9H3U1 944 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 CLSTN2Q9H4D0 955 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 JPH1Q9HDC5 661 aaPredicted RBP16.71■□□□□ 0.27
VPS18-202ENST00000558474 SLC9A2Q9UBY0 812 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 STK17AQ9UEE5 414 aa16.71■□□□□ 0.27
VPS18-202ENST00000558474 DDX41Q9UJV9 622 aaKnown RBP16.71■□□□□ 0.27
VPS18-202ENST00000558474 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
VPS18-202ENST00000558474 SLFN14P0C7P3 912 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 CYP2B6P20813 491 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 E2F4Q16254 413 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
VPS18-202ENST00000558474 CCDC62Q6P9F0 684 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 KRBA2Q6ZNG9 492 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 MIER3Q7Z3K6 550 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 GJA10Q969M2 543 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
VPS18-202ENST00000558474 ZSWIM8A7E2V4 1837 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 PP2D1A8MPX8 630 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 MYL1P05976 194 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 P4HBP07237 508 aaKnown RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 UBA1P22314 1058 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms