RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CCDC194A0A1B0GVG4 234 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 EVI5O60447 810 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 PPFIA4O75335 1185 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 RTP1P59025 263 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 CUL4AQ13619 759 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 DGKDQ16760 1214 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 PRR16Q569H4 304 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 PIK3AP1Q6ZUJ8 805 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
LRRC28-206ENST00000558471 FBXO18Q8NFZ0 1043 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
LRRC28-206ENST00000558471 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 SCN10AQ9Y5Y9 1956 aa14.21□□□□□ -0.13
LRRC28-206ENST00000558471 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
LRRC28-206ENST00000558471 GJB2P29033 226 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 CDK7P50613 346 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 SP4Q02446 784 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 ITGB3BPQ13352 177 aaPredicted RBP14.2□□□□□ -0.14
LRRC28-206ENST00000558471 ITGA7Q13683 1181 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 TRIM60Q495X7 471 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 C7orf61Q8IZ16 206 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 KAT2BQ92831 832 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 SNX21Q969T3 373 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 LENG9Q96B70 501 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 GPR20Q99678 358 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 SMC3Q9UQE7 1217 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 ATP11BQ9Y2G3 1177 aa14.2□□□□□ -0.14
LRRC28-206ENST00000558471 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.2□□□□□ -0.14
LRRC28-206ENST00000558471 NFASCO94856 1347 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 A0A0U1RQG5 324 aaPredicted RBP14.19□□□□□ -0.14
LRRC28-206ENST00000558471 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
LRRC28-206ENST00000558471 ARVCFO00192 962 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
LRRC28-206ENST00000558471 DHX15O43143 795 aaKnown RBP14.19□□□□□ -0.14
LRRC28-206ENST00000558471 TDP2O95551 362 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 CYP3A7P24462 503 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 TLE2Q04725 743 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 SAFBQ15424 915 aaKnown RBP eCLIP14.19□□□□□ -0.14
LRRC28-206ENST00000558471 NEK8Q86SG6 692 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 PPP1R13LQ8WUF5 828 aa14.19□□□□□ -0.14
LRRC28-206ENST00000558471 GSTTP1A0A1W2PQM5 241 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 IPO5O00410 1097 aaKnown RBP14.18□□□□□ -0.14
LRRC28-206ENST00000558471 MSH4O15457 936 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 ZNF286BP0CG31 522 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-206ENST00000558471 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 Q4G0T1 1027 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 MOXD1Q6UVY6 613 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 ANKRD33Q7Z3H0 272 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 SEPT1Q8WYJ6 367 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 MBOAT7Q96N66 472 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 SDF4Q9BRK5 362 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 C16orf70Q9BSU1 422 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 JPH1Q9HDC5 661 aaPredicted RBP14.18□□□□□ -0.14
LRRC28-206ENST00000558471 SLC9A2Q9UBY0 812 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 NR2E3Q9Y5X4 410 aa14.18□□□□□ -0.14
LRRC28-206ENST00000558471 DDX39AO00148 427 aaKnown RBP14.17□□□□□ -0.14
LRRC28-206ENST00000558471 PQBP1O60828 265 aaKnown RBP14.17□□□□□ -0.14
LRRC28-206ENST00000558471 LGALS2P05162 132 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 TCF7P36402 384 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-206ENST00000558471 CHMP4BP1P59074 171 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 UTP14CQ5TAP6 766 aaKnown RBP14.17□□□□□ -0.14
LRRC28-206ENST00000558471 PPP4R3AQ6IN85 833 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 GJA10Q969M2 543 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 TOX2Q96NM4 488 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-206ENST00000558471 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
LRRC28-206ENST00000558471 TRIP12Q14669 1992 aaPredicted RBP14.16□□□□□ -0.14
LRRC28-206ENST00000558471 KAT6AQ92794 2004 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 H0YGN5 161 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 HAS3O00219 553 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 SLC37A4O43826 429 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 CCNT1O60563 726 aaKnown RBP14.16□□□□□ -0.14
LRRC28-206ENST00000558471 CCNE2O96020 404 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 F2P00734 622 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 PSEN2P49810 448 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 ACTR2P61160 394 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 MFSD10Q14728 455 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 NFRKBQ6P4R8 1299 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 FAM126BQ8IXS8 530 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 SLC5A5Q92911 643 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 SEZ6LQ9BYH1 1024 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 TBC1D22BQ9NU19 505 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 PCDH10Q9P2E7 1040 aa14.16□□□□□ -0.14
LRRC28-206ENST00000558471 DDX25Q9UHL0 483 aaKnown RBP14.16□□□□□ -0.14
LRRC28-206ENST00000558471 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 MYH9P35579 1960 aaKnown RBP14.15□□□□□ -0.14
LRRC28-206ENST00000558471 H3BRB1 525 aa14.15□□□□□ -0.14
LRRC28-206ENST00000558471 WNT7AO00755 349 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms