RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 CPT1AP50416 773 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 TOB1P50616 345 aaPredicted RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ARHGAP1Q07960 439 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ZNF174Q15697 407 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ANO1Q5XXA6 986 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ANKLE1Q8NAG6 615 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 PCSK9Q8NBP7 692 aaKnown RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 U2AF1L4Q8WU68 220 aaKnown RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 SLC5A5Q92911 643 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ABHD8Q96I13 439 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
LRRC28-204ENST00000558172 CEP131Q9UPN4 1083 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 ATP6V1DQ9Y5K8 247 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 CENPFP49454 3210 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
LRRC28-204ENST00000558172 A6NJR5 290 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 SLC37A4O43826 429 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 KPNA6O60684 536 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 GAS7O60861 476 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 ADAMTS4O75173 837 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 CST5P28325 142 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 MCM7P33993 719 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 DDIT3P35638 169 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 KRT76Q01546 638 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 CALCRLQ16602 461 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 GJC2Q5T442 439 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 KLHDC9Q8NEP7 349 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 COPS5Q92905 334 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 ZNF396Q96N95 335 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 JPH1Q9HDC5 661 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-204ENST00000558172 SLC9A2Q9UBY0 812 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 PCDHB6Q9Y5E3 794 aa11.84□□□□□ -0.51
LRRC28-204ENST00000558172 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PSMD10O75832 226 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PGK1P00558 417 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PKP1Q13835 747 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 LRRC41Q15345 812 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 HAS1Q92839 578 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 LENG1Q96BZ8 264 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-204ENST00000558172 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
LRRC28-204ENST00000558172 KBTBD13C9JR72 458 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 DNM1LO00429 736 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 WNT7AO00755 349 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 CTAGE5O15320 804 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 MMP3P08254 477 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 OR52Z1P0C646 297 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 SFNP31947 248 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 PRPHP41219 470 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 JAK3P52333 1124 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 PTGDRQ13258 359 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 NBR1Q14596 966 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 DGKDQ16760 1214 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-204ENST00000558172 ARL6IP4Q66PJ3 421 aaKnown RBP11.82□□□□□ -0.52
LRRC28-204ENST00000558172 C4orf32Q8N8J7 132 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 RDM1Q8NG50 284 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-204ENST00000558172 GPR20Q99678 358 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 BCAS3Q9H6U6 928 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 CFAP45Q9UL16 551 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 ZDHHC9Q9Y397 364 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 ELP1O95163 1332 aa11.82□□□□□ -0.52
LRRC28-204ENST00000558172 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 WDR64B1ANS9 1081 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 CABYRO75952 493 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 ATG7O95352 703 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 HOXD8P13378 290 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 TXKP42681 527 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms