RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FBXO16Q8IX29 292 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 RGS22Q8NE09 1264 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 DNERQ8NFT8 737 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 EPS8L1Q8TE68 723 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 ASB2Q96Q27 587 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 MTG1Q9BT17 334 aaPredicted RBP10.19□□□□□ -0.78
VRK1-206ENST00000557222 WDR11Q9BZH6 1224 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 PRDM12Q9H4Q4 367 aa10.19□□□□□ -0.78
VRK1-206ENST00000557222 RAD50Q92878 1312 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 NMT2O60551 498 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 FGAP02671 866 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 NR3C2P08235 984 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 EDNRBP24530 442 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 CCL23P55773 120 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 PURAQ00577 322 aaKnown RBP10.18□□□□□ -0.78
VRK1-206ENST00000557222 ADGRE1Q14246 886 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 CCDC96Q2M329 555 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 MCMDC2Q4G0Z9 681 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 NFRKBQ6P4R8 1299 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 EEPD1Q7L9B9 569 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 OTOP2Q7RTS6 562 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 PHOSPHO2Q8TCD6 241 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 OTUD7AQ8TE49 926 aaPredicted RBP10.18□□□□□ -0.78
VRK1-206ENST00000557222 VWCEQ96DN2 955 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 TMEM47Q9BQJ4 181 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
VRK1-206ENST00000557222 TNKSO95271 1327 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 UMODL1Q5DID0 1318 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 LRRC37A2A6NM11 1700 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 A6NJR5 290 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 SNHG28P0DPA3 235 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 ACTN1P12814 892 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
VRK1-206ENST00000557222 SNAP25P60880 206 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 PSMC6P62333 389 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 CCDC178Q5BJE1 867 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
VRK1-206ENST00000557222 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 RNF207Q6ZRF8 634 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 SCFD2Q8WU76 684 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 CLEC4DQ8WXI8 215 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 ARHGAP9Q9BRR9 750 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 INCENPQ9NQS7 918 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 YBX2Q9Y2T7 364 aaKnown RBP10.17□□□□□ -0.78
VRK1-206ENST00000557222 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
VRK1-206ENST00000557222 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 NFIBO00712 420 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 HSPD1P10809 573 aaKnown RBP10.16□□□□□ -0.78
VRK1-206ENST00000557222 PDHBP11177 359 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 IGFBP4P22692 258 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 SLC16A2P36021 539 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 MFAP1P55081 439 aaKnown RBP10.16□□□□□ -0.78
VRK1-206ENST00000557222 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 BFSP2Q13515 415 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 PPP2R5BQ15173 497 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 AAK1Q2M2I8 961 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 TMEM67Q5HYA8 995 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 TMEM63BQ5T3F8 832 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 VASH1Q7L8A9 365 aaPredicted RBP10.16□□□□□ -0.78
VRK1-206ENST00000557222 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 SLC9A7Q96T83 725 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
VRK1-206ENST00000557222 REV3LO60673 3130 aa10.16□□□□□ -0.78
VRK1-206ENST00000557222 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 LCTP09848 1927 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 ZBBXA8MT70 800 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 KIF28PB7ZC32 967 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 BAIAP3O94812 1187 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 PARNO95453 639 aaKnown RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 MYL3P08590 195 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 PDE1AP54750 535 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 RPS6P62753 249 aaKnown RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 HDAC1Q13547 482 aaPredicted RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 AAMPQ13685 434 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 TTLL4Q14679 1199 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 NBPF20Q3BBV1 942 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 ANKRD45Q5TZF3 282 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 SESTD1Q86VW0 696 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 DGKHQ86XP1 1220 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 ADAMTS19Q8TE59 1207 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 PPM1EQ8WY54 764 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 SCLYQ96I15 445 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 TOMM22Q9NS69 142 aa10.15□□□□□ -0.78
VRK1-206ENST00000557222 TRMT13Q9NUP7 481 aaKnown RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 PRRC2BQ5JSZ5 2229 aaKnown RBP10.15□□□□□ -0.78
VRK1-206ENST00000557222 IQCF3P0C7M6 154 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 TXNP10599 105 aaKnown RBP10.14□□□□□ -0.79
VRK1-206ENST00000557222 CYP2C9P11712 490 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 PTGS1P23219 599 aa10.14□□□□□ -0.79
VRK1-206ENST00000557222 FSHRP23945 695 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms