RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TMEM192Q8IY95 271 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 IL31RAQ8NI17 732 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 SEPT8Q92599 483 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.735e-6■■□□□ 13.3
HNRNPC-227ENST00000556897 TOP1MTQ969P6 601 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 PABPC5Q96DU9 382 aaKnown RBP10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 SAMD11Q96NU1 681 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
HNRNPC-227ENST00000556897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 H3BRB1 525 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 TREHO43280 583 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 PPP1R11O60927 126 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 SMIM10L2AP0DMW4 78 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 SMIM10L2BP0DMW5 78 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 HOXC8P31273 242 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 NHLH1Q02575 133 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 GHRHRQ02643 423 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 PGM5Q15124 567 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 KCNV1Q6PIU1 500 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 VSIG10LQ86VR7 867 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 TICAM2Q86XR7 235 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 RILPL2Q969X0 211 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 FBXL18Q96ME1 805 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 IFIH1Q9BYX4 1025 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 RNPEPQ9H4A4 650 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 TUT1Q9H6E5 874 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 CLDND1Q9NY35 253 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 ZSWIM5Q9P217 1185 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 FAM50BQ9Y247 325 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 C5orf42Q9H799 3197 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
HNRNPC-227ENST00000556897 LGALS2P05162 132 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 TGFB3P10600 412 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 SDSP20132 328 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 LTBRP36941 435 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 NT5C2P49902 561 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 MFAP1P55081 439 aaKnown RBP10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 SETD4Q9NVD3 440 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 PRKAG3Q9UGI9 489 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 PCDHA1Q9Y5I3 950 aa10.49□□□□□ -0.73
HNRNPC-227ENST00000556897 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 KLRF2D3W0D1 207 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 NOP56O00567 594 aaKnown RBP10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 ZBTB5O15062 677 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 CAND2O75155 1236 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 CCND2P30279 289 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 CTNNB1P35222 781 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 IRS1P35568 1242 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 DLX2Q07687 328 aaPredicted RBP10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 CLUL1Q15846 466 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 HFE2Q6ZVN8 426 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 RPAINQ86UA6 219 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 TRIM50Q86XT4 487 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 FIBCD1Q8N539 461 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 MTMR8Q96EF0 704 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 IL17RAQ96F46 866 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 UBAC1Q9BSL1 405 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 LNPKQ9C0E8 428 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 MAP3K20Q9NYL2 800 aaKnown RBP10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 NLRC5Q86WI3 1866 aa10.48□□□□□ -0.73
HNRNPC-227ENST00000556897 COL4A6Q14031 1691 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 LAMA4Q16363 1823 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 GCOM1H8Y6P7 765 aaPredicted RBP10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 GRM6O15303 877 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 NCK2O43639 380 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 CSPG5O95196 566 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 POLR2MP0CAP2 368 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 SMAD2Q15796 467 aaKnown RBP10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 IMMTQ16891 758 aaKnown RBP10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 IFIT1BQ5T764 474 aaKnown RBP10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 HOMER1Q86YM7 354 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 APBB2Q92870 758 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 USP26Q9BXU7 913 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 MUTYHQ9UIF7 546 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 TELO2Q9Y4R8 837 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 BAZ2BQ9UIF8 2168 aaKnown RBP10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 TRIOO75962 3097 aa10.47□□□□□ -0.73
HNRNPC-227ENST00000556897 TECTAO75443 2155 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 C5orf67F2Z3F1 127 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 CHRNA1P02708 482 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 LINC00271P0C7V0 271 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 GNAT1P11488 350 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 GTF2F1P35269 517 aaKnown RBP eCLIP10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 BMPR1AP36894 532 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 ARHGAP4P98171 946 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 HYAL1Q12794 435 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 SLC35G1Q2M3R5 365 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 METTL7BQ6UX53 244 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms