RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
CHD8-211ENST00000556833 KHSRPQ92945 711 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHD8-211ENST00000556833 MAF1Q9H063 256 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 COG5Q9UP83 839 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
CHD8-211ENST00000556833 H3BRB1 525 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 HOXD8P13378 290 aaPredicted RBP17.1■□□□□ 0.33
CHD8-211ENST00000556833 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
CHD8-211ENST00000556833 GHRHRQ02643 423 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 SERINC5Q86VE9 423 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
CHD8-211ENST00000556833 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
CHD8-211ENST00000556833 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 FAM86C2PA6NEL3 165 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 E7EWF7 191 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 CSPG5O95196 566 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 PARNO95453 639 aaKnown RBP17.09■□□□□ 0.33
CHD8-211ENST00000556833 AMHP03971 560 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 ERVK-21P61565 698 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 KCNV1Q6PIU1 500 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 FBXO22Q8NEZ5 403 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 RNPEPQ9H4A4 650 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
CHD8-211ENST00000556833 ATG2AQ2TAZ0 1938 aa17.09■□□□□ 0.33
CHD8-211ENST00000556833 MYO7AQ13402 2215 aa17.08■□□□□ 0.33
CHD8-211ENST00000556833 CHMLP26374 656 aa17.08■□□□□ 0.32
CHD8-211ENST00000556833 ANTXR2P58335 489 aa17.08■□□□□ 0.32
CHD8-211ENST00000556833 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
CHD8-211ENST00000556833 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
CHD8-211ENST00000556833 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
CHD8-211ENST00000556833 PKD2L1Q9P0L9 805 aa17.08■□□□□ 0.32
CHD8-211ENST00000556833 EMSYQ7Z589 1322 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 EFCAB14O75071 495 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 RXRAP19793 462 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 KCNA5P22460 613 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 TROAPQ12815 778 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
CHD8-211ENST00000556833 GNPTABQ3T906 1256 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 YME1L1Q96TA2 773 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 UBE2ZQ9H832 354 aaPredicted RBP17.07■□□□□ 0.32
CHD8-211ENST00000556833 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
CHD8-211ENST00000556833 INSL6Q9Y581 213 aa17.07■□□□□ 0.32
CHD8-211ENST00000556833 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 TGFB3P10600 412 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 COL9A3Q14050 684 aaPredicted RBP17.06■□□□□ 0.32
CHD8-211ENST00000556833 PLEKHG4Q58EX7 1191 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 GPR20Q99678 358 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
CHD8-211ENST00000556833 PLEKHA8P1O95397 391 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 MARK3P27448 753 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 METTL7BQ6UX53 244 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 RUFY4Q6ZNE9 571 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 SEPT8Q92599 483 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
CHD8-211ENST00000556833 C1QTNF1Q9BXJ1 281 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 LOXHD1Q8IVV2 1947 aa17.05■□□□□ 0.32
CHD8-211ENST00000556833 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 RALGAPA2Q2PPJ7 1873 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 H3BQ06 376 aaPredicted RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 FIBPO43427 364 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 IL9P15248 144 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 NEDD9Q14511 834 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 UBE2SQ16763 222 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 SAMD3Q8N6K7 520 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 CUL5Q93034 780 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 RRP36Q96EU6 259 aaKnown RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 LRFN3Q9BTN0 628 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 IFIH1Q9BYX4 1025 aaKnown RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 LY9Q9HBG7 655 aa17.04■□□□□ 0.32
CHD8-211ENST00000556833 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
CHD8-211ENST00000556833 SGSM2O43147 1006 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 GHRP10912 638 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 HOXC8P31273 242 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 ICAM3P32942 547 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 HTRA4P83105 476 aaPredicted RBP17.03■□□□□ 0.32
CHD8-211ENST00000556833 TRAF1Q13077 416 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 LRRC2Q9BYS8 371 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms