RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CTC1Q2NKJ3 1217 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 TBC1D10CQ8IV04 446 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 PNMA1Q8ND90 353 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 ESR2Q92731 530 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 EDAQ92838 391 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 APBB2Q92870 758 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 FAM227BQ96M60 508 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 OSBPL7Q9BZF2 842 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-219ENST00000556432 KAT14Q9H8E8 782 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 RWDD3Q9Y3V2 267 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 TECTAO75443 2155 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 TMEM221A6NGB7 291 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 H3BRB1 525 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 M0R296 226 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 NOP56O00567 594 aaKnown RBP16.22■□□□□ 0.19
ACTN1-219ENST00000556432 CAND2O75155 1236 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 TBX10O75333 385 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 RB1P06400 928 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 PCP11498 1178 aaKnown RBP16.22■□□□□ 0.19
ACTN1-219ENST00000556432 UBA1P22314 1058 aaKnown RBP16.22■□□□□ 0.19
ACTN1-219ENST00000556432 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.19
ACTN1-219ENST00000556432 BMPR1AP36894 532 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 IER5LQ5T953 404 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 EVI5LQ96CN4 794 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 PDCD2LQ9BRP1 358 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 C16orf70Q9BSU1 422 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
ACTN1-219ENST00000556432 RALGAPA2Q2PPJ7 1873 aa16.22■□□□□ 0.19
ACTN1-219ENST00000556432 NEDD4P46934 1319 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 ZDBF2Q9HCK1 2354 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 A0A0D9SFI3 127 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 LINC01565O15544 149 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 LGALS2P05162 132 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
ACTN1-219ENST00000556432 GNAT1P11488 350 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 ASPRV1Q53RT3 343 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 TRIM67Q6ZTA4 783 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 IQCA1Q86XH1 822 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 PPP2R3CQ969Q6 453 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 PRRX2Q99811 253 aa16.21■□□□□ 0.19
ACTN1-219ENST00000556432 ADGRA3Q8IWK6 1321 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 RGS20O76081 388 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 CCND2P30279 289 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 HOXA13P31271 388 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-219ENST00000556432 HSD17B4P51659 736 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 SP2Q02086 613 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 BTG3Q14201 252 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-219ENST00000556432 PKN1Q16512 942 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 DGKHQ86XP1 1220 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-219ENST00000556432 RNPEPQ9H4A4 650 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
ACTN1-219ENST00000556432 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 MYH6P13533 1939 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 GFRA3O60609 400 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 GHRP10912 638 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 ARHGAP4P98171 946 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 PGM5Q15124 567 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 BMP8AQ7Z5Y6 402 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 ZNF589Q86UQ0 364 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-219ENST00000556432 IL31RAQ8NI17 732 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 AMNQ9BXJ7 453 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
ACTN1-219ENST00000556432 FAM86C1Q9NVL1 165 aa16.19■□□□□ 0.18
ACTN1-219ENST00000556432 ZFHX2Q9C0A1 2572 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-219ENST00000556432 KDM4AO75164 1064 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 MMP1P03956 469 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 TGFB3P10600 412 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 HOXC8P31273 242 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 FBXL6Q8N531 539 aa16.18■□□□□ 0.18
ACTN1-219ENST00000556432 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
ACTN1-219ENST00000556432 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-219ENST00000556432 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 OPLAHO14841 1288 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 ZXDAP98168 799 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 SP4Q02446 784 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 TCF15Q12870 199 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 NMIQ13287 307 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-219ENST00000556432 ADAM15Q13444 863 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
ACTN1-219ENST00000556432 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 FCHSD1Q86WN1 690 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 TRIM50Q86XT4 487 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 CLP1Q92989 425 aaKnown RBP16.17■□□□□ 0.18
ACTN1-219ENST00000556432 USP26Q9BXU7 913 aa16.17■□□□□ 0.18
ACTN1-219ENST00000556432 ZNF213O14771 459 aa16.16■□□□□ 0.18
ACTN1-219ENST00000556432 LMBR1Q8WVP7 490 aa16.16■□□□□ 0.18
ACTN1-219ENST00000556432 ATOH1Q92858 354 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-219ENST00000556432 ZSCAN10Q96SZ4 725 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-219ENST00000556432 PLVAPQ9BX97 442 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms