RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 MCM4P33991 863 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 SHMT1P34896 483 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 RCAN1P53805 252 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 AKAP17AQ02040 695 aaKnown RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 TROAPQ12815 778 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 FAM35AQ86V20 835 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 GPC2Q8N158 579 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 CTCFLQ8NI51 663 aaPredicted RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 PHKBQ93100 1093 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 CEP95Q96GE4 821 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 CSRNP1Q96S65 589 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 TMEM47Q9BQJ4 181 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 SLC26A6Q9BXS9 759 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 RBM28Q9NW13 759 aaKnown RBP7.35□□□□□ -1.23
HIF1A-208ENST00000556237 CLIP2Q9UDT6 1046 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 MTMR7Q9Y216 660 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 MTMR6Q9Y217 621 aa7.35□□□□□ -1.23
HIF1A-208ENST00000556237 ZBTB39O15060 712 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 GRIN3BO60391 1043 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 DDAH1O94760 285 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 MICAL2O94851 1124 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 F13A1P00488 732 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 EGFRP00533 1210 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 INPP5BP32019 993 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 KIF5BP33176 963 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 EPS15P42566 896 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 GNAQP50148 359 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 ATP2B2Q01814 1243 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 GUCY1B3Q02153 619 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 RASA3Q14644 834 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 NTRK3Q16288 839 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 KIF4BQ2VIQ3 1234 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 MCTP1Q6DN14 999 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 TATDN1Q6P1N9 297 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 MIGA2Q7L4E1 593 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
HIF1A-208ENST00000556237 FBXO11Q86XK2 927 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 CMTR1Q8N1G2 835 aaKnown RBP7.34□□□□□ -1.23
HIF1A-208ENST00000556237 WFDC12Q8WWY7 111 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 C8orf76Q96K31 380 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 ALG1Q9BT22 464 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 TMEM39BQ9GZU3 492 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 CABP5Q9NP86 173 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 MTMR4Q9NYA4 1195 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 GPRC5DQ9NZD1 345 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 HERC5Q9UII4 1024 aaKnown RBP7.34□□□□□ -1.23
HIF1A-208ENST00000556237 RNF112Q9ULX5 631 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
HIF1A-208ENST00000556237 TIAM2Q8IVF5 1701 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 MYH1P12882 1939 aa7.34□□□□□ -1.23
HIF1A-208ENST00000556237 IGKV6D-41A0A0C4DH26 115 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 GOLGA6L22H0YM25 854 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 PRPF3O43395 683 aaKnown RBP7.33□□□□□ -1.24
HIF1A-208ENST00000556237 TTLL1O95922 423 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 EPB42P16452 691 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 NOVP48745 357 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 IDH3AP50213 366 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 TNFAIP1Q13829 316 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 GRM4Q14833 912 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 ABCB5Q2M3G0 1257 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 OTUD7BQ6GQQ9 843 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 CLEC17AQ6ZS10 378 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 SRBD1Q8N5C6 995 aaKnown RBP7.33□□□□□ -1.24
HIF1A-208ENST00000556237 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
HIF1A-208ENST00000556237 WASF1Q92558 559 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 MAP3K14Q99558 947 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 DNAJC18Q9H819 358 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 KANSL2Q9H9L4 492 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 HACL1Q9UJ83 578 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 ATP6V1DQ9Y5K8 247 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 ARFGEF1Q9Y6D6 1849 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 CNTNAP1P78357 1384 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
HIF1A-208ENST00000556237 NAV1Q8NEY1 1877 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 ASTN2O75129 1339 aaPredicted RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 PRPF40AO75400 957 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 MAP3K6O95382 1288 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 PLEKHA8P1O95397 391 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 DEXIO95424 95 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 GH2P01242 217 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 PARP1P09874 1014 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 EEF2P13639 858 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 CPB1P15086 417 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 NOS3P29474 1203 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 GUCY1A2P33402 732 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 IREB2P48200 963 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 MTMR3Q13615 1198 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 TRIM29Q14134 588 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 RRP1BQ14684 758 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 SEPT2Q15019 361 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 ANGEL2Q5VTE6 544 aaKnown RBP7.32□□□□□ -1.24
HIF1A-208ENST00000556237 TMEM179Q6ZVK1 233 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 TMTC3Q6ZXV5 915 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 CDC37L1Q7L3B6 337 aa7.32□□□□□ -1.24
HIF1A-208ENST00000556237 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms