RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 HOXC8P31273 242 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 SKIV2LQ15477 1246 aaKnown RBP21.72■■□□□ 1.07
CDKN3-209ENST00000556102 METTL7BQ6UX53 244 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 SPRED2Q7Z698 418 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 CUL5Q93034 780 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 UHRF1Q96T88 793 aaPredicted RBP21.72■■□□□ 1.07
CDKN3-209ENST00000556102 LZTS2Q9BRK4 669 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 MYL10Q9BUA6 226 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 BCAS3Q9H6U6 928 aa21.72■■□□□ 1.07
CDKN3-209ENST00000556102 SPATA31C2B4DYI2 1134 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 PRC1O43663 620 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 LGR5O75473 907 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 SMIM10L2AP0DMW4 78 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 SMIM10L2BP0DMW5 78 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 THPOP40225 353 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 SEMA3FQ13275 785 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 GRB10Q13322 594 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 AAK1Q2M2I8 961 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 KRT40Q6A162 431 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 CYFIP1Q7L576 1253 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 SMARCC2Q8TAQ2 1214 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 ATP6V0A1Q93050 837 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 RAD9AQ99638 391 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 USP26Q9BXU7 913 aa21.71■■□□□ 1.07
CDKN3-209ENST00000556102 SEC63Q9UGP8 760 aaKnown RBP21.71■■□□□ 1.07
CDKN3-209ENST00000556102 KAT6AQ92794 2004 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 RSPH10B2B2RC85 870 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 PIK3CDO00329 1044 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 RSPH10BP0C881 870 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 MCM5P33992 734 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 GNAQP50148 359 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 PCNX4Q63HM2 1172 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 XRRA1Q6P2D8 792 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 USP17L6PQ6QN14 398 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 TMTC2Q8N394 836 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 TMEM87BQ96K49 555 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 GPR20Q99678 358 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 RTEL1Q9NZ71 1219 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 SIP14410 1827 aa21.7■■□□□ 1.06
CDKN3-209ENST00000556102 SH2B2O14492 632 aaPredicted RBP21.69■■□□□ 1.06
CDKN3-209ENST00000556102 MEIS2O14770 477 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 LPXNO60711 386 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 TFF2Q03403 129 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 NFXL1Q6ZNB6 911 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 SENP7Q9BQF6 1050 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 LSG1Q9H089 658 aaKnown RBP21.69■■□□□ 1.06
CDKN3-209ENST00000556102 RNPEPQ9H4A4 650 aa21.69■■□□□ 1.06
CDKN3-209ENST00000556102 XIRP2A4UGR9 3374 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 CCDC69A6NI79 296 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 TREHO43280 583 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 CAND2O75155 1236 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 PLEKHA8P1O95397 391 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 BMP1P13497 986 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
CDKN3-209ENST00000556102 DBF4BQ8NFT6 615 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 TGS1Q96RS0 853 aaKnown RBP21.68■■□□□ 1.06
CDKN3-209ENST00000556102 COG5Q9UP83 839 aa21.68■■□□□ 1.06
CDKN3-209ENST00000556102 BDP1A6H8Y1 2624 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 SLC27A2O14975 620 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 GNAT1P11488 350 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 LIFRP42702 1097 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 ERVK-21P61565 698 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 MKRN4PQ13434 485 aaPredicted RBP21.67■■□□□ 1.06
CDKN3-209ENST00000556102 PLEKHG4Q58EX7 1191 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 NLRX1Q86UT6 975 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 LMCD1Q9NZU5 365 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 ZNF215Q9UL58 517 aaPredicted RBP21.67■■□□□ 1.06
CDKN3-209ENST00000556102 BRWD1Q9NSI6 2320 aa21.67■■□□□ 1.06
CDKN3-209ENST00000556102 LINC01553A4QN01 128 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 AMHP03971 560 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 CALM1P0DP23 149 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 CALM2P0DP24 149 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 CALM3P0DP25 149 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 FAM117BQ6P1L5 589 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDKN3-209ENST00000556102 TRIM50Q86XT4 487 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 GIMAP8Q8ND71 665 aaPredicted RBP21.66■■□□□ 1.06
CDKN3-209ENST00000556102 GDPD5Q8WTR4 605 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 ESYT1Q9BSJ8 1104 aa21.66■■□□□ 1.06
CDKN3-209ENST00000556102 RBAK-RBAKDNI3L0D1 243 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 RXRAP19793 462 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 KCNQ1P51787 676 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
CDKN3-209ENST00000556102 UTP14CQ5TAP6 766 aaKnown RBP21.65■■□□□ 1.06
CDKN3-209ENST00000556102 CREB3L3Q68CJ9 461 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 MYOCDQ8IZQ8 938 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 GPRASP2Q96D09 838 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 PSTPIP2Q9H939 334 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 SETD4Q9NVD3 440 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 MTUS1Q9ULD2 1270 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 TELO2Q9Y4R8 837 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 INSL6Q9Y581 213 aa21.65■■□□□ 1.06
CDKN3-209ENST00000556102 CTSHP09668 335 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 SP4Q02446 784 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 NECTIN1Q15223 517 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 CMTR1Q8N1G2 835 aaKnown RBP21.64■■□□□ 1.05
CDKN3-209ENST00000556102 SEPT8Q92599 483 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 HLA-CQ95604 372 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 CDHR1Q96JP9 859 aa21.64■■□□□ 1.05
CDKN3-209ENST00000556102 SUGCTQ9HAC7 445 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms