RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 TCEAL9Q9UHQ7 104 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
TMEM260-208ENST00000555905 ZSWIM8A7E2V4 1837 aa12.44□□□□□ -0.42
TMEM260-208ENST00000555905 RGS20O76081 388 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 TGFB3P10600 412 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
TMEM260-208ENST00000555905 ICAM3P32942 547 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 UBA7P41226 1012 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 SPECC1Q5M775 1068 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 OLFML2BQ68BL8 750 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 GIMAP8Q8ND71 665 aaPredicted RBP12.43□□□□□ -0.42
TMEM260-208ENST00000555905 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
TMEM260-208ENST00000555905 GJA10Q969M2 543 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
TMEM260-208ENST00000555905 PKD2L1Q9P0L9 805 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
TMEM260-208ENST00000555905 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 A0A1B0GVL5 298 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 PSMD10O75832 226 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 PFKFB1P16118 471 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 FLT3LGP49771 235 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 CLCN6P51797 869 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 PRKCZQ05513 592 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 FAM160A1Q05DH4 1040 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 ITGB3BPQ13352 177 aaPredicted RBP12.42□□□□□ -0.42
TMEM260-208ENST00000555905 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 KRT79Q5XKE5 535 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 NCAPH2Q6IBW4 605 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
TMEM260-208ENST00000555905 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
TMEM260-208ENST00000555905 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 RASSF8Q8NHQ8 419 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 ERMNQ8TAM6 284 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 SCFD2Q8WU76 684 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 VAV3Q9UKW4 847 aa12.42□□□□□ -0.42
TMEM260-208ENST00000555905 NFASCO94856 1347 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 POTEMA6NI47 508 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
TMEM260-208ENST00000555905 CHMP2AO43633 222 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 TRAK2O60296 914 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
TMEM260-208ENST00000555905 KCNA2P16389 499 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 SYKP43405 635 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 NDUFA8P51970 172 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 KRT76Q01546 638 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 NEDD9Q14511 834 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 CABP7Q86V35 215 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 GPT2Q8TD30 523 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 ZNF296Q8WUU4 475 aaPredicted RBP12.41□□□□□ -0.42
TMEM260-208ENST00000555905 SENP7Q9BQF6 1050 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 PYM1Q9BRP8 204 aaKnown RBP12.41□□□□□ -0.42
TMEM260-208ENST00000555905 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 SRRDQ9UH36 339 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 KCNH3Q9ULD8 1083 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 GABRQQ9UN88 632 aa12.41□□□□□ -0.42
TMEM260-208ENST00000555905 PP2D1A8MPX8 630 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 DHX15O43143 795 aaKnown RBP12.4□□□□□ -0.42
TMEM260-208ENST00000555905 SLC26A4O43511 780 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
TMEM260-208ENST00000555905 ATP9AO75110 1047 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 TXNP10599 105 aaKnown RBP12.4□□□□□ -0.42
TMEM260-208ENST00000555905 LIG1P18858 919 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 CDC25AP30304 524 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 SFNP31947 248 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 IRF5Q13568 498 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 CCL14Q16627 93 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 MFSD14CQ5VZR4 134 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 HAUS3Q68CZ6 603 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 SNX29Q8TEQ0 813 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 CALML4Q96GE6 196 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 JPH1Q9HDC5 661 aaPredicted RBP12.4□□□□□ -0.42
TMEM260-208ENST00000555905 FLRT1Q9NZU1 646 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 ZHX1Q9UKY1 873 aaPredicted RBP12.4□□□□□ -0.42
TMEM260-208ENST00000555905 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
TMEM260-208ENST00000555905 KDM3AQ9Y4C1 1321 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 RBM47A0AV96 593 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms