RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 RFX7Q2KHR2 1363 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 DLEC1Q9Y238 1755 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.62□□□□□ -1.19
LINC00643-203ENST00000555518 KLRK1P26718 216 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 PHKA1P46020 1223 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 RING1Q06587 406 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 LRRC14Q15048 493 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 PI16Q6UXB8 463 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 RBM17Q96I25 401 aaKnown RBP7.62□□□□□ -1.19
LINC00643-203ENST00000555518 GPATCH3Q96I76 525 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 NEUROD6Q96NK8 337 aa7.62□□□□□ -1.19
LINC00643-203ENST00000555518 FAM155AB1AL88 458 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-203ENST00000555518 NPHP1O15259 732 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 LRIG2O94898 1065 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 EOMESO95936 686 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 ZSCAN22P10073 491 aaPredicted RBP7.61□□□□□ -1.19
LINC00643-203ENST00000555518 SLC5A1P13866 664 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 NPR1P16066 1061 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 MCAMP43121 646 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 UBE4AQ14139 1066 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 PPM1JQ5JR12 505 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 CNTROBQ8N137 903 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 STK35Q8TDR2 534 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 RPGRQ92834 1020 aaKnown RBP7.61□□□□□ -1.19
LINC00643-203ENST00000555518 RILPL2Q969X0 211 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 EVI5LQ96CN4 794 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
LINC00643-203ENST00000555518 MED23Q9ULK4 1368 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 DOCK2Q92608 1830 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 CHGBP05060 677 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 IFIT1P09914 478 aaKnown RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 NTF4P34130 210 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 PDE6BP35913 854 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 MFAP1P55081 439 aaKnown RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 GPSM2P81274 684 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 RASGRF1Q13972 1273 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 ZBTB37Q5TC79 503 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 TMCO4Q5TGY1 634 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 FYB2Q5VWT5 728 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 ZNF746Q6NUN9 644 aaPredicted RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 C15orf52Q6ZUT6 534 aaKnown RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 FBXO33Q7Z6M2 555 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 C1QL4Q86Z23 238 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 MASTLQ96GX5 879 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 FAM84BQ96KN1 310 aaPredicted RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 NECAB3Q96P71 396 aaPredicted RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 KRTAP4-11Q9BYQ6 195 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 ANTXR1Q9H6X2 564 aa7.6□□□□□ -1.19
LINC00643-203ENST00000555518 MYO5AQ9Y4I1 1855 aaKnown RBP7.6□□□□□ -1.19
LINC00643-203ENST00000555518 XDHP47989 1333 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 A0A0D9SFI3 127 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 GOLIM4O00461 696 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 SGSM2O43147 1006 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 BBOX1O75936 387 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 ZBTB7AO95365 584 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 ZNF865P0CJ78 1059 aaPredicted RBP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 CHRNA5P30532 468 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 GSTT1P30711 240 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 GYG1P46976 350 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 R3HDM1Q15032 1099 aaKnown RBP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 CCDC158Q5M9N0 1113 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 TTC39AQ5SRH9 613 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 STYK1Q6J9G0 422 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 OLFM4Q6UX06 510 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 PRR23BQ6ZRT6 265 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 SND1Q7KZF4 910 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 TMC4Q7Z404 712 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 THAP5Q7Z6K1 395 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 C2CD5Q86YS7 1000 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 KBTBD3Q8NAB2 608 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 COX4I2Q96KJ9 171 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 ANKRD2Q9GZV1 360 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 MTFR1LQ9H019 292 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 CARS2Q9HA77 564 aaKnown RBP7.59□□□□□ -1.19
LINC00643-203ENST00000555518 PAG1Q9NWQ8 432 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 HMG20BQ9P0W2 317 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 ATP6V0A2Q9Y487 856 aa7.59□□□□□ -1.19
LINC00643-203ENST00000555518 CACNA1SQ13698 1873 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 UQCRFS1P1P0C7P4 283 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 KCNA3P22001 575 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 NMIQ13287 307 aaPredicted RBP7.58□□□□□ -1.2
LINC00643-203ENST00000555518 SFRP5Q5T4F7 317 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 TICAM2Q86XR7 235 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 SP8Q8IXZ3 490 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 MFSD4AQ8N468 514 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 SPATA5Q8NB90 893 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 IL17RAQ96F46 866 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 FAM227BQ96M60 508 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 GPR101Q96P66 508 aaPredicted RBP7.58□□□□□ -1.2
LINC00643-203ENST00000555518 KIF2CQ99661 725 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 FSD1Q9BTV5 496 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 LSG1Q9H089 658 aaKnown RBP7.58□□□□□ -1.2
LINC00643-203ENST00000555518 PIH1D3Q9NQM4 214 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms