RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DUSP11O75319 330 aaKnown RBP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 ITGB5P18084 799 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 SREBF1P36956 1147 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 GNPTABQ3T906 1256 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 PRR16Q569H4 304 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 GNASQ5JWF2 1037 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-213ENST00000555386 KRT25Q7Z3Z0 450 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 DAGLBQ8NCG7 672 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 BCAS3Q9H6U6 928 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 SPC25Q9HBM1 224 aa11.18□□□□□ -0.62
PSEN1-213ENST00000555386 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
PSEN1-213ENST00000555386 GGPS1O95749 300 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 SP2Q02086 613 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 MTMR1Q13613 665 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 LRRC41Q15345 812 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 DUSP28Q4G0W2 176 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 MCTP2Q6DN12 878 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 RNF180Q86T96 592 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
PSEN1-213ENST00000555386 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
PSEN1-213ENST00000555386 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 PAWRQ96IZ0 340 aaKnown RBP11.17□□□□□ -0.62
PSEN1-213ENST00000555386 MXRA8Q9BRK3 442 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
PSEN1-213ENST00000555386 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 FAM86B1E9PN63 330 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 M0R2N6 131 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 FARP2O94887 1054 aaPredicted RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 TDP2O95551 362 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 MYL3P08590 195 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 FAM86B2P0C5J1 330 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 ARP10275 920 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 CCDC62Q6P9F0 684 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 PLA2G4DQ86XP0 818 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 ARRDC4Q8NCT1 418 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 AFG1LQ8WV93 481 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 GJA10Q969M2 543 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 INPP4AQ96PE3 977 aaPredicted RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 SENP6Q9GZR1 1112 aaPredicted RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 JADE2Q9NQC1 790 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 DDX41Q9UJV9 622 aaKnown RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
PSEN1-213ENST00000555386 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 MYH15Q9Y2K3 1946 aa11.16□□□□□ -0.62
PSEN1-213ENST00000555386 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 CCNT1O60563 726 aaKnown RBP11.15□□□□□ -0.62
PSEN1-213ENST00000555386 ATP9AO75110 1047 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 STAM2O75886 525 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 GH1P01241 217 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-213ENST00000555386 KCNA10Q16322 511 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.62
PSEN1-213ENST00000555386 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-213ENST00000555386 SPATA33Q96N06 139 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 KCNH7Q9NS40 1196 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 CCDC39Q9UFE4 941 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
PSEN1-213ENST00000555386 TELO2Q9Y4R8 837 aa11.15□□□□□ -0.62
PSEN1-213ENST00000555386 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
PSEN1-213ENST00000555386 NKRFO15226 690 aaKnown RBP eCLIP11.14□□□□□ -0.63
PSEN1-213ENST00000555386 EDIL3O43854 480 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 MARCH6O60337 910 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
PSEN1-213ENST00000555386 GJA9P57773 515 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 ARHGAP1Q07960 439 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 RESTQ13127 1097 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 CELF3Q5SZQ8 465 aaKnown RBP11.14□□□□□ -0.63
PSEN1-213ENST00000555386 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 CXCL17Q6UXB2 119 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 NEK8Q86SG6 692 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 FERMT3Q86UX7 667 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 FUCA2Q9BTY2 467 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 KAT6AQ92794 2004 aa11.14□□□□□ -0.63
PSEN1-213ENST00000555386 DNM1LO00429 736 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 MEIS1O00470 390 aa11.13□□□□□ -0.63
PSEN1-213ENST00000555386 ASGR1P07306 291 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms