RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GJC2Q5T442 439 aaPredicted RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 RNF180Q86T96 592 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 COPS5Q92905 334 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 SLC5A5Q92911 643 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 LENG1Q96BZ8 264 aaPredicted RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 JPH1Q9HDC5 661 aaPredicted RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 CEP131Q9UPN4 1083 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 SYNRGQ9UMZ2 1314 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 LAD1O00515 517 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 GAS7O60861 476 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 FARP2O94887 1054 aaPredicted RBP16.15■□□□□ 0.18
CHD8-208ENST00000555301 GJA8P48165 433 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 CPT1AP50416 773 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 NBR1Q14596 966 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 LRCH2Q5VUJ6 765 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 ARRDC4Q8NCT1 418 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 U2AF1L4Q8WU68 220 aaKnown RBP16.15■□□□□ 0.18
CHD8-208ENST00000555301 SPATA33Q96N06 139 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
CHD8-208ENST00000555301 TEKT3Q9BXF9 490 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 ZDHHC9Q9Y397 364 aa16.15■□□□□ 0.18
CHD8-208ENST00000555301 A6NJR5 290 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
CHD8-208ENST00000555301 DHX15O43143 795 aaKnown RBP16.14■□□□□ 0.17
CHD8-208ENST00000555301 ZEB2O60315 1214 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 PGK1P00558 417 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
CHD8-208ENST00000555301 CST5P28325 142 aaPredicted RBP16.14■□□□□ 0.17
CHD8-208ENST00000555301 KRT76Q01546 638 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 ATL3Q6DD88 541 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 TNS4Q8IZW8 715 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 HAS1Q92839 578 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 ABHD8Q96I13 439 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 CRISPLD2Q9H0B8 497 aa16.14■□□□□ 0.17
CHD8-208ENST00000555301 PSMD10O75832 226 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 PTGDRQ13258 359 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 HSDL1Q3SXM5 330 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 C4orf32Q8N8J7 132 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 PCSK9Q8NBP7 692 aaKnown RBP16.13■□□□□ 0.17
CHD8-208ENST00000555301 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 TMEM60Q9H2L4 133 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
CHD8-208ENST00000555301 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
CHD8-208ENST00000555301 SORBS3O60504 671 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 KPNA6O60684 536 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 PTGS1P23219 599 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 PRPHP41219 470 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 TXKP42681 527 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
CHD8-208ENST00000555301 LRRC41Q15345 812 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 DGKDQ16760 1214 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 GNASQ5JWF2 1037 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 SEPT1Q8WYJ6 367 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 UIMC1Q96RL1 719 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 GPR20Q99678 358 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 TTC12Q9H892 705 aaPredicted RBP16.12■□□□□ 0.17
CHD8-208ENST00000555301 POLR3EQ9NVU0 708 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 CFAP45Q9UL16 551 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 PCDHA12Q9UN75 941 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 ELP1O95163 1332 aa16.12■□□□□ 0.17
CHD8-208ENST00000555301 POTEFA5A3E0 1075 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 MOXD2PA6NHM9 499 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 DNM1LO00429 736 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 CTAGE5O15320 804 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
CHD8-208ENST00000555301 MMP3P08254 477 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 SFNP31947 248 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 JAK3P52333 1124 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 ACTR2P61160 394 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 SP4Q02446 784 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 PPP2R5CQ13362 524 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 TMEM266Q2M3C6 531 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 ARL6IP4Q66PJ3 421 aaKnown RBP16.11■□□□□ 0.17
CHD8-208ENST00000555301 RDM1Q8NG50 284 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 GJA10Q969M2 543 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 USP28Q96RU2 1077 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
CHD8-208ENST00000555301 RAB34Q9BZG1 259 aa16.11■□□□□ 0.17
CHD8-208ENST00000555301 CLIC4Q9Y696 253 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms