RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TCEAL9Q9UHQ7 104 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 DHX15O43143 795 aaKnown RBP18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 GAS7O60861 476 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 PSMD10O75832 226 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 YEATS4O95619 227 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 GGPS1O95749 300 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 KRT85P78386 507 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 ITGB3BPQ13352 177 aaPredicted RBP18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 LRCH2Q5VUJ6 765 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 MLXIPQ9HAP2 919 aa18.58■□□□□ 0.56
SPTLC2-203ENST00000554901 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 CCL5P13501 91 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 KRT76Q01546 638 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 SLC39A14Q15043 492 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 PTPAQ15257 358 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 TLK2Q86UE8 772 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 TEKT3Q9BXF9 490 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 AP5M1Q9H0R1 490 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 UNC93B1Q9H1C4 597 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 UPF3AQ9H1J1 476 aaKnown RBP18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 SPC25Q9HBM1 224 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 JPH1Q9HDC5 661 aaPredicted RBP18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 SLC9A2Q9UBY0 812 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 PCDHA12Q9UN75 941 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 CLIC4Q9Y696 253 aa18.57■□□□□ 0.56
SPTLC2-203ENST00000554901 ADCY6O43306 1168 aa18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 GJA9P57773 515 aa18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 DNM1Q05193 864 aaKnown RBP18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 BRDTQ58F21 947 aaPredicted RBP18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 ZNF746Q6NUN9 644 aaPredicted RBP18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 CYFIP1Q7L576 1253 aa18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 RNF208Q9H0X6 261 aa18.56■□□□□ 0.56
SPTLC2-203ENST00000554901 PPP2R5CQ13362 524 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 MTFR1Q15390 333 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 LHX8Q68G74 356 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 B3GNT9Q6UX72 402 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 SMAP1Q8IYB5 467 aaPredicted RBP18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 LINC00301Q8NCQ3 95 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 OR6J1Q8NGC5 347 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 FERMT2Q96AC1 680 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 SCAND2PQ9GZW5 306 aaPredicted RBP18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 TTC12Q9H892 705 aaPredicted RBP18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 PKD2L1Q9P0L9 805 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 TFIP11Q9UBB9 837 aaKnown RBP18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
SPTLC2-203ENST00000554901 A6NJR5 290 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 DYNC1LI2O43237 492 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 PPP6R2O75170 966 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 GJB1P08034 283 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 SFNP31947 248 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 TXKP42681 527 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 CPT1AP50416 773 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 FXR2P51116 673 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 PDIA5Q14554 519 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 STK38Q15208 465 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 DTHD1Q6ZMT9 781 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 KCNG4Q8TDN1 519 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 COPS5Q92905 334 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 SPATA33Q96N06 139 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 VAV3Q9UKW4 847 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 ELP1O95163 1332 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 SYNRGQ9UMZ2 1314 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 NOP56O00567 594 aaKnown RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 HOXD8P13378 290 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 CST5P28325 142 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 JAK3P52333 1124 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 FOXD4L6Q3SYB3 417 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 GJC2Q5T442 439 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 FOXD4L3Q6VB84 417 aaPredicted RBP18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 STK24Q9Y6E0 443 aa18.54■□□□□ 0.56
SPTLC2-203ENST00000554901 WDR64B1ANS9 1081 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 SPTLC2O15270 562 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 KPNA6O60684 536 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 ADAMTS4O75173 837 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 ATG7O95352 703 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 CEBPZQ03701 1054 aaKnown RBP18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 SPIRE1Q08AE8 756 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 RNF180Q86T96 592 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 ARRDC4Q8NCT1 418 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 GPR20Q99678 358 aa18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 SRPRBQ9Y5M8 271 aaKnown RBP18.53■□□□□ 0.56
SPTLC2-203ENST00000554901 ZEB2O60315 1214 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 ACTR2P61160 394 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 HSDL1Q3SXM5 330 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 IGSF22Q8N9C0 903 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 KLHDC9Q8NEP7 349 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms