RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CELF3Q5SZQ8 465 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 ARL6IP4Q66PJ3 421 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 ZNF746Q6NUN9 644 aaPredicted RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 METTL7BQ6UX53 244 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 RNF180Q86T96 592 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 FERMT3Q86UX7 667 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 ANKLE1Q8NAG6 615 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 PCSK9Q8NBP7 692 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 ARRDC4Q8NCT1 418 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 LENG9Q96B70 501 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 TEKT3Q9BXF9 490 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 UPF3AQ9H1J1 476 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 MLXIPQ9HAP2 919 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 AGO4Q9HCK5 861 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 KCNMB3Q9NPA1 279 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 POLR3EQ9NVU0 708 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 CHMP5Q9NZZ3 219 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 SLC9A2Q9UBY0 812 aa9.11□□□□□ -0.95
LINC01397-201ENST00000554808 GNEQ9Y223 722 aaKnown RBP9.11□□□□□ -0.95
LINC01397-201ENST00000554808 LAMA3Q16787 3333 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 KBTBD13C9JR72 458 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 DKC1O60832 514 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 FARP2O94887 1054 aaPredicted RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TDP2O95551 362 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 YEATS4O95619 227 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 GGPS1O95749 300 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 OR52Z1P0C646 297 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 KCNA2P16389 499 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 SMPD1P17405 629 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 CCND3P30281 292 aaPredicted RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 MCM7P33993 719 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 JAK3P52333 1124 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TRIM32Q13049 653 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 HABP4Q5JVS0 413 aaKnown RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 PRAMEF19Q5SWL8 479 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 LRCH2Q5VUJ6 765 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TRPV1Q8NER1 839 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 OR6J1Q8NGC5 347 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 PPTC7Q8NI37 304 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 ETNPPLQ8TBG4 499 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 NEK9Q8TD19 979 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 SLC5A5Q92911 643 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TNPO1Q92973 898 aaKnown RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TSEN34Q9BSV6 310 aaKnown RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 SEZ6LQ9BYH1 1024 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 UNC93B1Q9H1C4 597 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 JPH1Q9HDC5 661 aaPredicted RBP9.1□□□□□ -0.95
LINC01397-201ENST00000554808 XPNPEP3Q9NQH7 507 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 PDGFCQ9NRA1 345 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 OGDHLQ9ULD0 1010 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 TANC1Q9C0D5 1861 aa9.1□□□□□ -0.95
LINC01397-201ENST00000554808 ELP1O95163 1332 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SYNRGQ9UMZ2 1314 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 FAM205CA6NFA0 338 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 MOXD2PA6NHM9 499 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 A6NJR5 290 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 WDR64B1ANS9 1081 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 DNM1LO00429 736 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 MSH4O15457 936 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SLC26A4O43511 780 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SLC37A4O43826 429 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 PSMD10O75832 226 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 CABYRO75952 493 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ARIH2O95376 493 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SGPL1O95470 568 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ARP10275 920 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 GJA8P48165 433 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 TOB1P50616 345 aaPredicted RBP9.09□□□□□ -0.95
LINC01397-201ENST00000554808 KRT85P78386 507 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ATP2C1P98194 919 aaPredicted RBP9.09□□□□□ -0.95
LINC01397-201ENST00000554808 PPP2R5CQ13362 524 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 PDIA5Q14554 519 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 DGKDQ16760 1214 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ANO1Q5XXA6 986 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ERMNQ8TAM6 284 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 CYP2W1Q8TAV3 490 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SEPT1Q8WYJ6 367 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 FERMT2Q96AC1 680 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SPATA33Q96N06 139 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 MTMR9Q96QG7 549 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 KATNAL1Q9BW62 490 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
LINC01397-201ENST00000554808 ZNF215Q9UL58 517 aaPredicted RBP9.09□□□□□ -0.95
LINC01397-201ENST00000554808 PCDHA12Q9UN75 941 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 PCDHB6Q9Y5E3 794 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 DNAH12Q6ZR08 3092 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 COL6A3P12111 3177 aa9.09□□□□□ -0.95
LINC01397-201ENST00000554808 EMSYQ7Z589 1322 aa9.08□□□□□ -0.96
LINC01397-201ENST00000554808 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.08□□□□□ -0.96
LINC01397-201ENST00000554808 DYNC1LI2O43237 492 aaPredicted RBP9.08□□□□□ -0.96
LINC01397-201ENST00000554808 EDIL3O43854 480 aa9.08□□□□□ -0.96
LINC01397-201ENST00000554808 PPP6R2O75170 966 aa9.08□□□□□ -0.96
LINC01397-201ENST00000554808 ADAMTS4O75173 837 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms