RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 CXXC1Q9P0U4 656 aaPredicted RBP13.27□□□□□ -0.29
TMEM253-203ENST00000554329 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
TMEM253-203ENST00000554329 COL6A3P12111 3177 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 NOP56O00567 594 aaKnown RBP13.26□□□□□ -0.29
TMEM253-203ENST00000554329 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
TMEM253-203ENST00000554329 KCNA2P16389 499 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
TMEM253-203ENST00000554329 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
TMEM253-203ENST00000554329 MTMR1Q13613 665 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 TMEM240Q5SV17 173 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 OTOP2Q7RTS6 562 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 SAMD3Q8N6K7 520 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 GJA10Q969M2 543 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 GPR20Q99678 358 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 C16orf70Q9BSU1 422 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 MAF1Q9H063 256 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 UBIAD1Q9Y5Z9 338 aa13.26□□□□□ -0.29
TMEM253-203ENST00000554329 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 F2P00734 622 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 IFNAR1P17181 557 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 ICAM3P32942 547 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 PBX2P40425 430 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 RCAN1P53805 252 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
TMEM253-203ENST00000554329 TCTN1Q2MV58 587 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 NLRX1Q86UT6 975 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 FBXL16Q8N461 479 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 TMEM199Q8N511 208 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 C7orf31Q8N865 590 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
TMEM253-203ENST00000554329 OSBPL7Q9BZF2 842 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 JADE2Q9NQC1 790 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 GTF2IRD1Q9UHL9 959 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 KCNJ14Q9UNX9 436 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
TMEM253-203ENST00000554329 GSTTP1A0A1W2PQM5 241 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 HAS3O00219 553 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 CPLX1O14810 134 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-203ENST00000554329 ZNF76P36508 570 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 EVCP57679 992 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 ARHGAP4P98171 946 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-203ENST00000554329 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-203ENST00000554329 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 RNF26Q9BY78 433 aaPredicted RBP13.24□□□□□ -0.29
TMEM253-203ENST00000554329 SETD4Q9NVD3 440 aa13.24□□□□□ -0.29
TMEM253-203ENST00000554329 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 H3BRB1 525 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 TREHO43280 583 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 EDIL3O43854 480 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 JAK2O60674 1132 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 KPNA6O60684 536 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 CTSHP09668 335 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 SMIM10L2AP0DMW4 78 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 SMIM10L2BP0DMW5 78 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 SREBF1P36956 1147 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 NEK4P51957 841 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 NLRP5P59047 1200 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 NEDD9Q14511 834 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 ME3Q16798 604 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 KCNV1Q6PIU1 500 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 TRMT1LQ7Z2T5 733 aaKnown RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 DEFB123Q8N688 67 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 RNPEPQ9H4A4 650 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 TUT1Q9H6E5 874 aaKnown RBP13.23□□□□□ -0.29
TMEM253-203ENST00000554329 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 IL23AQ9NPF7 189 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
TMEM253-203ENST00000554329 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 STAM2O75886 525 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 TGFB3P10600 412 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 HOXD8P13378 290 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-203ENST00000554329 MYOGP15173 224 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 RABGGTBP53611 331 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 IGBP1P78318 339 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 GPNMBQ14956 572 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 PLA2G4DQ86XP0 818 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-203ENST00000554329 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 PCYT2Q99447 389 aa13.22□□□□□ -0.29
TMEM253-203ENST00000554329 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms