RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 C17orf80Q9BSJ5 609 aa9.47□□□□□ -0.89
ACTN1-212ENST00000554158 CPVLQ9H3G5 476 aa9.47□□□□□ -0.89
ACTN1-212ENST00000554158 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
ACTN1-212ENST00000554158 MAP3K20Q9NYL2 800 aaKnown RBP9.47□□□□□ -0.89
ACTN1-212ENST00000554158 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 GRXCR2A6NFK2 248 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 DCXO43602 365 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 GGPS1O95749 300 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 TGFB3P10600 412 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 IL9P15248 144 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 PDE4AP27815 886 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 IMMTQ16891 758 aaKnown RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 EPC2Q52LR7 807 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.96e-6■□□□□ 8.2
ACTN1-212ENST00000554158 TBC1D10CQ8IV04 446 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 SAMD3Q8N6K7 520 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 DBF4BQ8NFT6 615 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 PPP2R3CQ969Q6 453 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 IFIH1Q9BYX4 1025 aaKnown RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 KRT23Q9C075 422 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 NSUN3Q9H649 340 aaKnown RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 CNNM2Q9H8M5 875 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 CLDND1Q9NY35 253 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 PRKAG3Q9UGI9 489 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 ZNF215Q9UL58 517 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-212ENST00000554158 RWDD3Q9Y3V2 267 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 ATG2AQ2TAZ0 1938 aa9.46□□□□□ -0.9
ACTN1-212ENST00000554158 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 ERICH2A1L162 156 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 B4E1Z4 1266 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 H3BRB1 525 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 HAS3O00219 553 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 HIP1O00291 1037 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 CAND2O75155 1236 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 PPP1R37O75864 691 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 CTSHP09668 335 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 CTNNB1P35222 781 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 ZNF200P98182 395 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 TRDNQ13061 729 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 CELF3Q5SZQ8 465 aaKnown RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 ZNF589Q86UQ0 364 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 SERINC5Q86VE9 423 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 APBB2Q92870 758 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 PABPC5Q96DU9 382 aaKnown RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 COL20A1Q9P218 1284 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-212ENST00000554158 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 NEDD4P46934 1319 aa9.45□□□□□ -0.9
ACTN1-212ENST00000554158 H3BNC9 293 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-212ENST00000554158 POLR2MP0CAP2 368 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 HTRA4P83105 476 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-212ENST00000554158 NEDD9Q14511 834 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 GPNMBQ14956 572 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 PGM5Q15124 567 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 PLEKHG4Q58EX7 1191 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 TCEAL5Q5H9L2 206 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 RSPH3Q86UC2 560 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 FCHSD1Q86WN1 690 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-212ENST00000554158 IL17RAQ96F46 866 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 PDCD2LQ9BRP1 358 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 C11orf84Q9BUA3 381 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-212ENST00000554158 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 JMJD4Q9H9V9 463 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 CD320Q9NPF0 282 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 C11orf16Q9NQ32 467 aa9.44□□□□□ -0.9
ACTN1-212ENST00000554158 TTC3P53804 2025 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 KIAA1671Q9BY89 1806 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 KLRF2D3W0D1 207 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 ZBTB5O15062 677 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 STAM2O75886 525 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 LGALS2P05162 132 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 SDSP20132 328 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 UBA1P22314 1058 aaKnown RBP9.43□□□□□ -0.9
ACTN1-212ENST00000554158 HOXA13P31271 388 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-212ENST00000554158 MRE11P49959 708 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 HSD17B4P51659 736 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 ARHGAP4P98171 946 aa9.43□□□□□ -0.9
ACTN1-212ENST00000554158 TRIM71Q2Q1W2 868 aaKnown RBP9.43□□□□□ -0.9
ACTN1-212ENST00000554158 CWC27Q6UX04 472 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms