RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
ATXN3-224ENST00000554040 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 PLXNA1Q9UIW2 1896 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 A0A0U1RQG5 324 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 A0A1W2PRG0 241 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 PRR33A8MZF0 331 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 RFXAPO00287 272 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 CD4P01730 458 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 PGK2P07205 417 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 MYOGP15173 224 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 CST5P28325 142 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 CRTC2Q53ET0 693 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 PCSK9Q8NBP7 692 aaKnown RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 MMP19Q99542 508 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 TANGO6Q9C0B7 1094 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 EHD4Q9H223 541 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 CD320Q9NPF0 282 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-224ENST00000554040 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
ATXN3-224ENST00000554040 SYNRGQ9UMZ2 1314 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 PTPRZ1P23471 2315 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 MYADML2A6NDP7 307 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 TLR3O15455 904 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 IGSF3O75054 1194 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 DUSP11O75319 330 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 ASGR1P07306 291 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 GRNP28799 593 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 SHMT1P34896 483 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 SEC13P55735 322 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 NHLH1Q02575 133 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 PTK7Q13308 1070 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 KCTD2Q14681 263 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 TMEM132BQ14DG7 1078 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 SEPT2Q15019 361 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 RPUSD2Q8IZ73 545 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 MSL3Q8N5Y2 521 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
ATXN3-224ENST00000554040 DMGDHQ9UI17 866 aaKnown RBP8.34□□□□□ -1.07
ATXN3-224ENST00000554040 CACNA1AO00555 2505 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 LGR5O75473 907 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 FLOT1O75955 427 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
ATXN3-224ENST00000554040 GATA4P43694 442 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 PLCD1P51178 756 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 KIAA1755Q5JYT7 1200 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 KRT40Q6A162 431 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 Q8N3U1 123 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 KCNH6Q9H252 994 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 SPC25Q9HBM1 224 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 ADAMTS5Q9UNA0 930 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 SIPA1L1O43166 1804 aa8.33□□□□□ -1.08
ATXN3-224ENST00000554040 ZDBF2Q9HCK1 2354 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 SRGAP3O43295 1099 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 SNAI1O95863 264 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-224ENST00000554040 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-224ENST00000554040 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-224ENST00000554040 STAT3P40763 770 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 USP5P45974 858 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 CCL23P55773 120 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 GJA9P57773 515 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 GABPAQ06546 454 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 MAMDC4Q6UXC1 1216 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 CERS3Q8IU89 383 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 GJD3Q8N144 294 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 SLC43A3Q8NBI5 491 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 BHMTQ93088 406 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 VWCEQ96DN2 955 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 UIMC1Q96RL1 719 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 UPF3AQ9H1J1 476 aaKnown RBP8.32□□□□□ -1.08
ATXN3-224ENST00000554040 CERS4Q9HA82 394 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 TRANK1O15050 2925 aa8.32□□□□□ -1.08
ATXN3-224ENST00000554040 UMODL1Q5DID0 1318 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 ZNF236Q9UL36 1845 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
ATXN3-224ENST00000554040 CA3P07451 260 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 ALADP13716 330 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 CYP7A1P22680 504 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 COPB2P35606 906 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 NKX3-2P78367 333 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 DPYDQ12882 1025 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms