RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 TRPA1O75762 1119 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 PSMD10O75832 226 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 EDNRBP24530 442 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 CCT6AP40227 531 aaKnown RBP11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 RGS2P41220 211 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 STAT6P42226 847 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 SEPT14Q6ZU15 432 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 PDILTQ8N807 584 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 ENGASEQ8NFI3 743 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 SNX29Q8TEQ0 813 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 DHX58Q96C10 678 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 CUEDC2Q9H467 287 aa11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
TMEM55B-205ENST00000554028 COBLO75128 1261 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 HOXD10P28358 340 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 ICAM3P32942 547 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 PSMC4P43686 418 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 KRT76Q01546 638 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 SP3Q02447 781 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 PPP2R5CQ13362 524 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 SNW1Q13573 536 aaKnown RBP11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 NEDD9Q14511 834 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 KCTD17Q8N5Z5 321 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 CFHR5Q9BXR6 569 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 LRRC27Q9C0I9 530 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 GZF1Q9H116 711 aaPredicted RBP11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 R3HDMLQ9H3Y0 253 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 CLSTN2Q9H4D0 955 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 PKD2L1Q9P0L9 805 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 SAMM50Q9Y512 469 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
TMEM55B-205ENST00000554028 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 CHMP2AO43633 222 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 HSPA6P17066 643 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 CDC25AP30304 524 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 SFNP31947 248 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 JAK3P52333 1124 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 HTRA3P83110 453 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 LACTBP83111 547 aaPredicted RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 AMPD3Q01432 767 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 EPHA7Q15375 998 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 CAMK4Q16566 473 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 MORN1Q5T089 497 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 KRBA2Q6ZNG9 492 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 ARMCX2Q7L311 632 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 ELOA2Q8IYF1 753 aaPredicted RBP11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 RDM1Q8NG50 284 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 GJA10Q969M2 543 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 MAGEF1Q9HAY2 307 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 VTA1Q9NP79 307 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 DISC1Q9NRI5 854 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 TMEM63CQ9P1W3 806 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 SERTAD1Q9UHV2 236 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 NFASCO94856 1347 aa11.74□□□□□ -0.53
TMEM55B-205ENST00000554028 WDR64B1ANS9 1081 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 ASTN1O14525 1302 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 SMC2O95347 1197 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 HOXC6P09630 235 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 MUTP22033 750 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 RPA1P27694 616 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 TCHHQ07283 1943 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 ZSCAN23Q3MJ62 389 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 SASS6Q6UVJ0 657 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 SMAP1Q8IYB5 467 aaPredicted RBP11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 SCFD2Q8WU76 684 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 APBA2Q99767 749 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 TINF2Q9BSI4 451 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 TUFT1Q9NNX1 390 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms