RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CKBP12277 381 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PTK7Q13308 1070 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 NEDD9Q14511 834 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 METTL7BQ6UX53 244 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 MICAL3Q7RTP6 2002 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 H3BRB1 525 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ZBTB43O43298 467 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CPA1P15085 419 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SP4Q02446 784 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 RBL2Q08999 1139 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 FUT2Q10981 343 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 KRT32Q14532 448 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 RTN1Q16799 776 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 NLRX1Q86UT6 975 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 USP38Q8NB14 1042 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 GPR20Q99678 358 aa13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TUT1Q9H6E5 874 aaKnown RBP13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 RBM28Q9NW13 759 aaKnown RBP13.66□□□□□ -0.22
TRAPPC6B-204ENST00000554018 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SPDYE3A6NKU9 549 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 NBNO60934 754 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ATP9AO75110 1047 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ITGB5P18084 799 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TCTN1Q2MV58 587 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 UTP14CQ5TAP6 766 aaKnown RBP13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TYW1BQ6NUM6 668 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 KCNB2Q92953 911 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SENP7Q9BQF6 1050 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 V9GY48 417 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 BRWD1Q9NSI6 2320 aa13.65□□□□□ -0.22
TRAPPC6B-204ENST00000554018 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 C17orf102A2RUQ5 167 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GOLGA8BA8MQT2 603 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 BAIAP3O94812 1187 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CXCL10P02778 98 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 THPOP40225 353 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ATP6V0A1Q93050 837 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GPRASP2Q96D09 838 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SLC9A7Q96T83 725 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PKD2L1Q9P0L9 805 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 UBIAD1Q9Y5Z9 338 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TREHO43280 583 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CA3P07451 260 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 KCNA2P16389 499 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 IGFBP4P22692 258 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CDC27P30260 824 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 HOXC8P31273 242 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 HSPA4P34932 840 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 KCNJ6P48051 423 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 NAPAP54920 295 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 WDR5P61964 334 aaKnown RBP13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 FGD1P98174 961 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CNKSR3Q6P9H4 555 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 Q6ZUG5 572 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RIC8AQ9NPQ8 531 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SETD4Q9NVD3 440 aa13.63□□□□□ -0.23
TRAPPC6B-204ENST00000554018 WDR81Q562E7 1941 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 STXBP3O00186 592 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ADD1P35611 737 aaKnown RBP13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ADCY7P51828 1080 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 DEFB103AP81534 67 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MTMR1Q13613 665 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms