RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PSEN2P49810 448 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 CHMP4BP1P59074 171 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 ARHGAP4P98171 946 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 CEP55Q53EZ4 464 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 MCTP2Q6DN12 878 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 SESTD1Q86VW0 696 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 GIMAP8Q8ND71 665 aaPredicted RBP23.26■■□□□ 1.31
FOXA1-203ENST00000553751 BICD2Q8TD16 824 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 RASGRP4Q8TDF6 673 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 GTF3C6Q969F1 213 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 C16orf70Q9BSU1 422 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
FOXA1-203ENST00000553751 KATNAL1Q9BW62 490 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 PPP1R12CQ9BZL4 782 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 KCNH7Q9NS40 1196 aa23.26■■□□□ 1.31
FOXA1-203ENST00000553751 MAFGO15525 162 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 FPGSQ05932 587 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 MFSD10Q14728 455 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 NECAB1Q8N987 351 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 C22orf23Q9BZE7 217 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 HIPK3Q9H422 1215 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 PKD2L1Q9P0L9 805 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 UMODL1Q5DID0 1318 aa23.25■■□□□ 1.31
FOXA1-203ENST00000553751 DTNBO60941 627 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 LGALS2P05162 132 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 CYP3A4P08684 503 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 SUPT20HL2P0C7V6 817 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 RBM25P49756 843 aaKnown RBP23.24■■□□□ 1.31
FOXA1-203ENST00000553751 EPHB4P54760 987 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 NLRP5P59047 1200 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 KIAA0753Q2KHM9 967 aa23.24■■□□□ 1.31
FOXA1-203ENST00000553751 FAM177A1Q8N128 213 aaPredicted RBP23.24■■□□□ 1.31
FOXA1-203ENST00000553751 FAM86B1E9PN63 330 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 MEIS1O00470 390 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 FAM86B2P0C5J1 330 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 CYP2C9P11712 490 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 CYP2C18P33260 490 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 SP4Q02446 784 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 NPY5RQ15761 445 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 CTAGE1Q96RT6 745 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 ALG1Q9BT22 464 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 GTF2IRD1Q9UHL9 959 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 PCDHA4Q9UN74 947 aa23.23■■□□□ 1.31
FOXA1-203ENST00000553751 IGLV3-22A0A075B6J6 115 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 ARP10275 920 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 C9orf50Q5SZB4 431 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 GDF6Q6KF10 455 aaPredicted RBP23.22■■□□□ 1.31
FOXA1-203ENST00000553751 NIPA1Q7RTP0 329 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 C7orf31Q8N865 590 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 DAGLBQ8NCG7 672 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 HDAC6Q9UBN7 1215 aa23.22■■□□□ 1.31
FOXA1-203ENST00000553751 SOX1O00570 391 aaPredicted RBP23.21■■□□□ 1.31
FOXA1-203ENST00000553751 ZNF76P36508 570 aa23.21■■□□□ 1.31
FOXA1-203ENST00000553751 ST3GAL1Q11201 340 aa23.21■■□□□ 1.31
FOXA1-203ENST00000553751 ITGB3BPQ13352 177 aaPredicted RBP23.21■■□□□ 1.31
FOXA1-203ENST00000553751 LRIT3Q3SXY7 679 aa23.21■■□□□ 1.31
FOXA1-203ENST00000553751 TRIM50Q86XT4 487 aa23.21■■□□□ 1.31
FOXA1-203ENST00000553751 TMEM199Q8N511 208 aa23.21■■□□□ 1.31
FOXA1-203ENST00000553751 AGO4Q9HCK5 861 aaKnown RBP23.21■■□□□ 1.31
FOXA1-203ENST00000553751 NFASCO94856 1347 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 H3BRB1 525 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 M0R2N6 131 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 FDPSP14324 419 aaKnown RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 CSF2RAP15509 400 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 TCF7P36402 384 aaPredicted RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 SHHQ15465 462 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 PTGISQ16647 500 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 BLIDQ8IZY5 108 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 NSUN7Q8NE18 718 aaKnown RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 PHF20Q9BVI0 1012 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 TUT1Q9H6E5 874 aaKnown RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 JPH1Q9HDC5 661 aaPredicted RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 ORC3Q9UBD5 711 aaPredicted RBP23.2■■□□□ 1.3
FOXA1-203ENST00000553751 KCNJ14Q9UNX9 436 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 SZT2Q5T011 3432 aa23.2■■□□□ 1.3
FOXA1-203ENST00000553751 GSTTP1A0A1W2PQM5 241 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 PPIGQ13427 754 aaKnown RBP eCLIP23.19■■□□□ 1.3
FOXA1-203ENST00000553751 HIC1Q14526 733 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 GALNT17Q6IS24 598 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 SLC9A2Q9UBY0 812 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 LIMCH1Q9UPQ0 1083 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 NOD1Q9Y239 953 aa23.19■■□□□ 1.3
FOXA1-203ENST00000553751 TANC1Q9C0D5 1861 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 EDIL3O43854 480 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 HOXC8P31273 242 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 CIITAP33076 1130 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 CCL23P55773 120 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 UTP14CQ5TAP6 766 aaKnown RBP23.18■■□□□ 1.3
FOXA1-203ENST00000553751 C16orf59Q7L2K0 433 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 SEPT1Q8WYJ6 367 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 SDF4Q9BRK5 362 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 GJB4Q9NTQ9 266 aa23.18■■□□□ 1.3
FOXA1-203ENST00000553751 ZNF215Q9UL58 517 aaPredicted RBP23.18■■□□□ 1.3
FOXA1-203ENST00000553751 PITPNM1O00562 1244 aa23.17■■□□□ 1.3
FOXA1-203ENST00000553751 JAK2O60674 1132 aa23.17■■□□□ 1.3
FOXA1-203ENST00000553751 SMIM10L2AP0DMW4 78 aa23.17■■□□□ 1.3
FOXA1-203ENST00000553751 SMIM10L2BP0DMW5 78 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms